Pairwise Alignments

Query, 440 a.a., ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis from Pseudomonas putida KT2440

Subject, 473 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  278 bits (710), Expect = 3e-79
 Identities = 153/380 (40%), Positives = 226/380 (59%), Gaps = 11/380 (2%)

Query: 1   MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLN 60
           +F+   L   +L+A+AE  + EPTP+Q  AIP  L GRDL   AQTG+GKTA F LP+L 
Sbjct: 2   LFTDLGLKAEILRAIAEQGYTEPTPIQQQAIPAVLAGRDLMACAQTGTGKTAGFTLPILQ 61

Query: 61  RLVDLSGPRVEI-------RALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKE 113
            L         +       R LIL PTRELA Q  + V+ + Q   +KS  + GG     
Sbjct: 62  LLSQAQAGESPLNRLARKPRVLILAPTRELALQVEESVRTYGQHLPLKSMSMFGGVGMNP 121

Query: 114 QAAMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKEC 173
           Q A L++  D+L+  PGRLL+ +N   LDLS +++L+LDEADRMLDMGF  D+ ++    
Sbjct: 122 QIAALKRGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMGFIRDIRKILALL 181

Query: 174 --ENREQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHDQHKE 231
               + Q LLFSAT     ++++    L DP+ + +   +   E   Q++I  D ++ K+
Sbjct: 182 PPNGKRQNLLFSATFSDE-IKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKD 240

Query: 232 QIAQWLLANETFDKAIIFTNTRAMADRIYGHLVAKDVKAFVLHGEKDQKDRKLAIERFKQ 291
            +   L  N  +++ +IFT T+  AD +   L  + +++  LHG K Q  R  A+  FK+
Sbjct: 241 VLLH-LFENRGWNQVLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQGARVRALTEFKE 299

Query: 292 GSSKVLVATDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLITHND 351
           G    LVATD+AARG+DID L  V+N+++P   ++YVHR+GRTGRAG EG AISL+ H++
Sbjct: 300 GKLVALVATDIAARGIDIDQLPYVVNYELPNVAEDYVHRIGRTGRAGAEGEAISLVCHDE 359

Query: 352 WNLMSSIERYLKQQFERRVI 371
            + + SIER +K+  E+ V+
Sbjct: 360 RDNLRSIERLIKKDLEKEVL 379