Pairwise Alignments

Query, 308 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 56.6 bits (135), Expect = 7e-13
 Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 22/296 (7%)

Query: 7   NPDAFAFQVMLGLCLIWGCQQVLIKTAAVDIAPVMQAALRNGIAAVLVGLMLCWRGGWEQ 66
           N  +    +M    + WG   V  K     I P+    +R  IAAV+   ++ +   + +
Sbjct: 2   NDRSLGILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVI---LIFFIRNFTK 58

Query: 67  VGSTWRAGLVAGGLFGVE--FLFIAEGLKLTSAAHMSVFLYTAPVFTALG---LHFRLPS 121
                   +V  G  G+   +LF    LK T+A + S+   T P+F  +    +  ++PS
Sbjct: 59  YSKEDFVYIVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEKKIPS 118

Query: 122 ERLRLLQWLGILLAFGGIAMAFAGGSSFEHMDGRTLLGDAFGVIAGLAWGATTVVV-RCS 180
           +    +++ G L+   G+ +    G     ++    LGD     A   W   T V+ +  
Sbjct: 119 K----IKYFGSLIGLFGVFILILNGKFVLELNP---LGDILMFGAVCTWVLYTFVIQKLQ 171

Query: 181 RLSEAPATLTLFYQLAVGFAGLLLIALLSGQIG----AVSLTPLAMGSVLFQGIVVSFIS 236
           +  +   T  +    AV F    ++ L  G  G     + L P    S+L+  I  S I+
Sbjct: 172 KHDDLKVTRDITLIGAVFFIPFTIMEL--GYNGMFEFTILLNPYIAFSLLYLAIFCSAIA 229

Query: 237 YLTWFWLLRKYLASNLAVFSFITPLFGVTFGVLLLDEPLSANFVVGALMVLLGVIL 292
           YL W   +R   AS      +I P+  +    ++L    +   ++GA++VL GV +
Sbjct: 230 YLFWNMAIRLAGASTTTNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLVLFGVYI 285