Pairwise Alignments

Query, 459 a.a., putative Sodium-solute symporter from Pseudomonas putida KT2440

Subject, 496 a.a., sodium/proline symporter PutP from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (296), Expect = 4e-31
 Identities = 117/477 (24%), Positives = 211/477 (44%), Gaps = 34/477 (7%)

Query: 9   MIYTAGMLGLGWYGMRRAKTHEDYLVAGRNLGPVLYMGTMATTVLGGASTVGTVRLGYVH 68
           ++Y   ML +G Y  +R K   DY + GR+LGP     +   + + G   +G     Y  
Sbjct: 12  IVYLILMLAIGVYAYQRTKNSADYFLGGRSLGPWPAALSAGASDMSGWLLLGLPGYAYAA 71

Query: 69  GISGFWLCAALGLGIIAINLFLAKPLLRLRIFTVT-------QVLEQRYNPTAR---QAS 118
           GI  FWL   L +G  A  L  AK   RLR +++T       + L +R+N  ++     S
Sbjct: 72  GIESFWLAGGLLVGTWANWLVNAK---RLRTYSITTDSLTLPEFLSRRFNDNSKLIQTIS 128

Query: 119 AVIMLAYALMIGVTSTLAMATVLQVLLDLPFWASLMLGGGVVVLYSTIGGMWSLTLTDIV 178
           A  +L + L    +  +A   + + +  L +  ++++G   VV Y+  GG  +++ TD+V
Sbjct: 129 AFFILLFFLFYTSSGLVAGGKLFETVFGLDYSTAVIIGTVCVVSYTLFGGFLAVSWTDLV 188

Query: 179 QFVIKTVGLMFILLPVCLYKAGGWDTLVAKLPAASFQLTTIGWDT--------IITYFLI 230
           Q ++    LM  ++P+     GG+  L   L A + +L T+  D          I   + 
Sbjct: 189 QGLLMAAALM--IVPIAAMN-GGFTQLNHDLAAINPELLTLWNDAKGEPLSAIAIISLVA 245

Query: 231 YFFGILIGQDIWQRVFTARDEKVCQRAGTAAGVYCVLYGLACAAIGMAAHVLMPD----- 285
           +  G      I  R   +R  K    A   A V+  L       +G+   + +       
Sbjct: 246 WGLGYFGQPHILARFKASRSNKDLITARRIAVVWTGLSMAGAILVGLTGLIFVTQSGTIG 305

Query: 286 LANPNNAFAEMIKTTLPDGIRGLLMAAALAAMMSTASAGLLAASTTVTEDLLP---KLRG 342
           L +    F  ++ +     I G+L+AA LAA+MSTA + LL +S+ + ED      K   
Sbjct: 306 LDDGEKIFMLLVNSLFHPVIAGILLAAILAAIMSTADSQLLVSSSALAEDFYKQVFKTDA 365

Query: 343 GKQSSLGTSRLFTLLTGLVVLGIALMV-NDVINALTLAYNLLVGGMLIPLIGAIFWKRAT 401
             +  +   R+  +L  L+ L +A+   + V+  ++ A+          L+ +++W R  
Sbjct: 366 SSEDIVRVGRIAVILISLIALFLAMTPDSSVLGLVSYAWAGFGAAFGPALVLSLYWPRMN 425

Query: 402 TAGAIASMSLGFATALLFMFLDGLEANT-PIYYSLAVGLVSFVGVSLVSRKSVAAVK 457
             GA++ + +G  T +++  L G   +   I   + +  +S V VSL++ +    VK
Sbjct: 426 RHGALSGIIVGGVTIVVWKQLSGGWFDVYEIVPGIILSTLSIVVVSLLTGEPDEKVK 482