Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 297 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 20/297 (6%)

Query: 7   DLKLLRIFISVVRHQGFANAQRELNLSTSAISTYMSQLEGALGIVLCHRGRGG--FSLTS 64
           DLK L  F+ +V   GF  A   +++S  A+S  ++QLE  L + L  RG+ G    LT 
Sbjct: 2   DLKALHYFVEIVASGGFNRAAERIHISQPALSKSIAQLETELALPLLTRGKRGTKVQLTP 61

Query: 65  KGELFHQETLRLLAELDGFEQYAAALKGELRGTLNLGVIDSTVGDRALPLAEAIGAYSQE 124
            GE+ ++  LRLL +     +  A LKG  RG L LG+  + +G   L  A  I  Y Q 
Sbjct: 62  HGEVVYRHALRLLEDKQTMMEELAQLKGLNRGILKLGL--APLGSAEL-FAPIIAKYRQA 118

Query: 125 HPAVHLHLSVSSPYELQLGVQDNRLDLAIGA--FSSRMSGLLYQPLYREQHWLYCSSRHP 182
           +P +   L V    E    +Q   ++LA G      R  G+    ++ E   +   S HP
Sbjct: 119 YPEIETQLLVRGGVEQTQALQQGEIELATGIIDLKDRYEGI---AIHTEPMVVVLPSEHP 175

Query: 183 LYAERRIP-EQVVTQQRMVGRGYWSQAELARHGFKHSAATVES------MEAQLILILSG 235
           L     IP  ++  Q +++    +S  E+  +   H+  ++++       E  + L+ +G
Sbjct: 176 LARRSEIPLGELDGQAQILFESEFSLHEMVINACLHAGVSIKNPTQVNQPEFGVALVAAG 235

Query: 236 AYIGYLPEHYAQAW-VDKGDLRVLSPSTFGYQAPFSLIIRRGRSREPLIQTFRDLLK 291
             +  LP+  A+ +  D    R L+ +   +Q   SL  R+  S     Q   DL+K
Sbjct: 236 IGLMLLPKFIAERYRPDAVITRPLTQTDLSWQ--MSLFWRKDLSLSFAAQAMIDLVK 290