Pairwise Alignments

Query, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  238 bits (606), Expect = 5e-67
 Identities = 171/535 (31%), Positives = 271/535 (50%), Gaps = 44/535 (8%)

Query: 6   PVTEHERTFPGDQRLISTTDLDSRITYCNDAFVAISGFTYDELVGQPHNLVRHPDMPPAV 65
           P  + E       +L+STTDL   ITYCND F  I+GF  DEL+G+ HN+VRH  MP A 
Sbjct: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81

Query: 66  FGHMWETIKQGKPWMGIVKNRAKNGDYYWVSAYVTAIYEQGRISGYESVRSVPTREQIRR 125
           F  MW  +KQG  W GIVKNR K+G +YWV AYVT IY+QG+++GY+SVR    R+ +  
Sbjct: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141

Query: 126 A----EALYARLRDGR-------SPVPWAARLGHGLGHGWPLIGAGLLSAAGYLWLP--- 171
           A    +AL A  + G+       + + +A  LG  +    P +  G  +   + WL    
Sbjct: 142 ATKAYQALLAAEKAGKKIQFKLHTSLRYALLLGALMS---PALAHGFQAPEQWQWLASLL 198

Query: 172 PYAALAVLMASLLLAWYWVEHRQNQAIRRTLAEHPKAFTSPLVALTYSDNPGLKGQLDLA 231
           P   L +L    L+       R  Q +++   E+       +  L YS         D  
Sbjct: 199 PAGVLGLLFRQELV-------RTPQQLKQWQNEY-----DSISRLIYSGADAF-SVADYH 245

Query: 232 IISEEARLQTALTRLVDAGVGVKSRAAQSSDLSDAQAQMLDRQRSE---TDQSATAIAQM 288
           +    AR++T L R++D+   +   A Q    +    Q L  Q S      Q+  A+   
Sbjct: 246 LKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESA 305

Query: 289 AATIQQVTHNVQSTAHAASDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQT 348
           A  +   TH+         D     +    +  ++L+ + + +++          L++Q 
Sbjct: 306 AERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESA---ALTTLKLSDQA 362

Query: 349 QSIGSVVDVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIH 408
           Q +G ++  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L+ RT+ +T++I 
Sbjct: 363 QQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQ 422

Query: 409 HIIASLRAGAE--RAVSTASRG--EQISRDSVHSVEAVQAALSGIAVAVSRITGMSQQMA 464
             I ++ +  E  R   TASR   EQ ++D+  +++ +Q     +   +S +  +  ++A
Sbjct: 423 TSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQ----DVECVMSDMLRVIGEVA 478

Query: 465 TASEQQSHVAEDINQQIVRIAQLCDQSAGQARQGAEISQDLERMAEYLHSLAERF 519
           +A++ Q  +  ++NQ I  IA +  Q++       +++  +        +L+++F
Sbjct: 479 SAAQHQRELTCEVNQHIHSIASVATQNSAATHTVEQLAMAMSGKVAEFGALSKQF 533