Pairwise Alignments

Query, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

Subject, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  353 bits (906), Expect = e-102
 Identities = 206/525 (39%), Positives = 300/525 (57%), Gaps = 11/525 (2%)

Query: 1   MRMNLPVTEHERTFPGDQRLISTTDLDSRITYCNDAFVAISGFTYDELVGQPHNLVRHPD 60
           MR NLPVT H         ++STT  DS ITY N  F+ ISGF  +EL+GQPHN+VRHPD
Sbjct: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64

Query: 61  MPPAVFGHMWETIKQGKPWMGIVKNRAKNGDYYWVSAYVTAIYEQGRISGYESVRSVPTR 120
           MPPA F HMW T+K G+ WMG+VKNR KNGD+YWVSA+   I + G++  Y+SVR+ P  
Sbjct: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEP 124

Query: 121 EQIRRAEALYARLRDGRSPVPWAARLGHGLGHGWPLI----GAGLLSAAGYLWLPPYAAL 176
             ++ AE  YA+LR+G++ +P        LG  W LI    G+   S A    + P A +
Sbjct: 125 SHVQAAEKAYAQLRNGKNILPKIR-----LGFHWKLILLVWGSLFASIAIVSLIYPSALM 179

Query: 177 AVLMASLLLAWYWVEHRQNQAI--RRTLAEHPKAFTSPLVALTYSDNPGLKGQLDLAIIS 234
           ++L  +LL+            +  +R +  + K   +PL  + Y+      GQL+ A+  
Sbjct: 180 SILFLTLLVGSITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFALRM 239

Query: 235 EEARLQTALTRLVDAGVGVKSRAAQSSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQ 294
            +A     + R+ DA   +   A       +    +   Q++ET+Q ATAI +MAA+IQ+
Sbjct: 240 AQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQE 299

Query: 295 VTHNVQSTAHAASDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQTQSIGSV 354
           V    +  A+++  A+     G ++  ++ + +  +   V+   Q ++ L E +  I  V
Sbjct: 300 VATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDISKV 359

Query: 355 VDVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIHHIIASL 414
           ++VI SIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT+ ST +I  +I +L
Sbjct: 360 LEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMIDTL 419

Query: 415 RAGAERAVSTASRGEQISRDSVHSVEAVQAALSGIAVAVSRITGMSQQMATASEQQSHVA 474
           +  A+ AV+      Q +  SV   +    AL+GI   VS ITGMS QMATA +QQS V+
Sbjct: 420 QGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSAVS 479

Query: 475 EDINQQIVRIAQLCDQSAGQARQGAEISQDLERMAEYLHSLAERF 519
           ++IN  I  I    D +    +  A+ ++ +  ++  L  LA++F
Sbjct: 480 DEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524