Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens FW300-N2E2

 Score = 1197 bits (3096), Expect = 0.0
 Identities = 602/715 (84%), Positives = 652/715 (91%), Gaps = 7/715 (0%)

Query: 1   MLEQAQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLT 60
           MLEQAQRVLKDIFGYDSFRGRQ AIIE VA+GGDALVLMPTGGGKSLCFQVP LLR GL 
Sbjct: 1   MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA 60

Query: 61  VVVSPLIALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQ 120
           VVVSPLIALMDDQVATL+ELGV+AA+LNSTL+AEQQR+LA R+RRGEVKMLYLAPERLVQ
Sbjct: 61  VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIRRGEVKMLYLAPERLVQ 120

Query: 121 PRMLDFLRDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT 180
           PRML FL+ L+I+LFAIDEAHCVSQWGHDFR EYLQLGQLAELFP VPRIALTATAD RT
Sbjct: 121 PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT 180

Query: 181 REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKK 240
           REEIV+RLHLQ AERFLSSFDRPNIFYRIVPKE PRKQL+AFL ERR +AGIVYCLSRKK
Sbjct: 181 REEIVERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKK 240

Query: 241 VDETAAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV 300
           VDE AAFLC QGFPALPYHAGL  + RA +Q RFLNEEGLIMVATIAFGMGIDKPNVRFV
Sbjct: 241 VDEVAAFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV 300

Query: 301 AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK 360
           AHLDLPKSLEAYYQETGRAGRDGLP+DAWMAYGLQD+VMLKQMLQ+SEGDERHKR+EQHK
Sbjct: 301 AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQSSEGDERHKRLEQHK 360

Query: 361 LDAMLALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTG 420
           LDAML+LCEETRCRRQ+LLAYFDE + QPCGHCDNCVD ++TWDATEPARQALSA+FRTG
Sbjct: 361 LDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIFRTG 420

Query: 421 QRYGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLE 480
           QRYGVGHLVDVLLGKD EKVR+FGH+ LSVFGVGK   E EWRSLFRQLVARGL DIDLE
Sbjct: 421 QRYGVGHLVDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLE 480

Query: 481 GYGGLRLSDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQLVRAEERDLWEALR 540
           GYGGLRLS +CRPLL+GEVTL+LRRDLKP T  K+S S     ASQLVR EERD WEALR
Sbjct: 481 GYGGLRLSATCRPLLKGEVTLELRRDLKPATAVKSSKSQ----ASQLVRGEERDQWEALR 536

Query: 541 TLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVLN 600
            LRRKLAEEH VPPYVIFPDSTLLEMLRSQP SL++MA+VSGVGARKLERYG+AFL+VL 
Sbjct: 537 ALRRKLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQVL- 595

Query: 601 NSGGTDEAPKVVLDLRHELVSLARAGMTPAQIAGQLNCSEKNVYSLLAEALGRQELSLDQ 660
             GG  EAPK V D+RHEL++LARAGMTP QIAGQL CSEKNVY++LAEA+G+Q+LSL+Q
Sbjct: 596 --GGEAEAPKAVADVRHELITLARAGMTPLQIAGQLQCSEKNVYTMLAEAIGKQQLSLEQ 653

Query: 661 AIDLPEDLMMEVQDAFLDGEGELPPVSAIAPQFGARVPEGVLYCVRAALAAEFEL 715
           A+DLPE+LM EVQDAFLDGEGELPPVS +A  F  RVPEGVLYCVRAAL +EFE+
Sbjct: 654 ALDLPEELMGEVQDAFLDGEGELPPVSEVAALFVGRVPEGVLYCVRAALQSEFEV 708