Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 707 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas stutzeri RCH2

 Score = 1165 bits (3014), Expect = 0.0
 Identities = 579/715 (80%), Positives = 641/715 (89%), Gaps = 8/715 (1%)

Query: 1   MLEQAQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLT 60
           ML+QAQR+LKD+FGYD+FRG Q AIIE V +GGDALVLMPTGGGKSLC+QVP LLR GL 
Sbjct: 1   MLDQAQRILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLRDGLA 60

Query: 61  VVVSPLIALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQ 120
           VVVSPLIALMDDQVATLDELGVSA ALNSTL+ ++QR++A R+RR E+KMLYLAPERLVQ
Sbjct: 61  VVVSPLIALMDDQVATLDELGVSAVALNSTLSPDEQRDIAERIRRNEIKMLYLAPERLVQ 120

Query: 121 PRMLDFLRDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT 180
           PRML FL+ L+I+LFAIDEAHCVSQWGHDFRPEY+QLGQL+ELFP VPRIALTATADMRT
Sbjct: 121 PRMLAFLQRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLSELFPGVPRIALTATADMRT 180

Query: 181 REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKK 240
           REEIVQRLHL+ AERFLSSFDRPNIFYRIVPKE PRKQL+ FL ERRG+AGIVYC+SRKK
Sbjct: 181 REEIVQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKK 240

Query: 241 VDETAAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV 300
           VD+ AAFL  QGFPALPYHAGL  E RA +Q RFLNEEGLIMVATIAFGMGIDKPNVRFV
Sbjct: 241 VDDFAAFLTEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV 300

Query: 301 AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK 360
           AHLDLPKSLEAYYQETGRAGRDGLP+DAWMAYGLQD++ LKQML NSEGDERHKR+EQHK
Sbjct: 301 AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHK 360

Query: 361 LDAMLALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTG 420
           LDAMLALCEETRCRRQ+LLAYFDE L  PCGHCDNCVD +QTWDATEPARQALSA++R+G
Sbjct: 361 LDAMLALCEETRCRRQALLAYFDEELPSPCGHCDNCVDGVQTWDATEPARQALSAIYRSG 420

Query: 421 QRYGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLE 480
           QRYGVGHLVDVLLG+D +KVR  GH+ LSVFGVGK LAE EWRSLFRQLVARGL D+DL+
Sbjct: 421 QRYGVGHLVDVLLGRDNDKVRGLGHQHLSVFGVGKALAETEWRSLFRQLVARGLADVDLD 480

Query: 481 GYGGLRLSDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQLVRAEERDLWEALR 540
           G+GGLRLSDSCRPLLRGEV+L+LRRDL  +     +S+     ASQLVR+EER+ WEALR
Sbjct: 481 GFGGLRLSDSCRPLLRGEVSLELRRDLSSKAPKPAASA-----ASQLVRSEERETWEALR 535

Query: 541 TLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVLN 600
           TLRRKLAEEHSVPPYVIFPD+TLLEMLRSQP SLSDMA +SGVGARKLERYGQAFLEVL 
Sbjct: 536 TLRRKLAEEHSVPPYVIFPDATLLEMLRSQPASLSDMAMISGVGARKLERYGQAFLEVLQ 595

Query: 601 NSGGTDEAPKVVLDLRHELVSLARAGMTPAQIAGQLNCSEKNVYSLLAEALGRQELSLDQ 660
              G  +  K   DLRHEL++LARAGMTPAQIA QL+CSEKNVY++LAEA+G Q+LSL+Q
Sbjct: 596 ---GNSDVAKPPADLRHELITLARAGMTPAQIARQLDCSEKNVYAMLAEAIGLQQLSLEQ 652

Query: 661 AIDLPEDLMMEVQDAFLDGEGELPPVSAIAPQFGARVPEGVLYCVRAALAAEFEL 715
           A+DLPEDL+ E+Q+AFLDGEGELPPVSA+A QF  RVPE VLYCVRAAL  EFEL
Sbjct: 653 ALDLPEDLLGEIQEAFLDGEGELPPVSAVAEQFAGRVPEQVLYCVRAALQVEFEL 707