Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 636 a.a., ATP-dependent DNA helicase from Sinorhizobium meliloti 1021

 Score =  642 bits (1655), Expect = 0.0
 Identities = 320/594 (53%), Positives = 418/594 (70%), Gaps = 4/594 (0%)

Query: 8   VLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVSPLI 67
           +LK I+GY +FRG+Q A+++ V  GGDA+VL PTG GKSLCFQ+P L R G+ +VVSPLI
Sbjct: 40  LLKRIYGYSTFRGQQQAVVDHVVAGGDAVVLFPTGAGKSLCFQIPALCRRGVGIVVSPLI 99

Query: 68  ALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRMLDFL 127
           ALM DQV  L +LG+ AAALNS+LT ++   +   L R E+ +LY+ PER V     + +
Sbjct: 100 ALMRDQVEALKQLGIRAAALNSSLTRDEAIAVRRALSRDELDLLYVTPERAVTDGFAEMI 159

Query: 128 RDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRTREEIVQR 187
            D DI+LFAIDEAHCVSQWGHDFRPEY  LG LAE FP VPRIALTATAD  TR+++++R
Sbjct: 160 ADADIALFAIDEAHCVSQWGHDFRPEYRGLGCLAERFPGVPRIALTATADPHTRDDMIER 219

Query: 188 LHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKKVDETAAF 247
           L L GA  F SSFDRPNI Y IV ++ PR+QL+ FL   +  +GIVYCLSR KV++TA +
Sbjct: 220 LGLGGARVFASSFDRPNIAYEIVERDQPRQQLLRFLSRFKDASGIVYCLSRAKVEDTAEW 279

Query: 248 LCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDLPK 307
           L +QG  ALPYHAG+    R A+Q  FL EE L +VAT+AFGMGIDKP+VR+VAHLDLP 
Sbjct: 280 LDAQGIRALPYHAGMERAARDAHQDAFLKEENLCLVATVAFGMGIDKPDVRYVAHLDLPG 339

Query: 308 SLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHKLDAMLAL 367
           S+EAYYQETGRAGRDGLPS+ WMAYG+ D++  ++M+      E  KRIE+ KL+++LA+
Sbjct: 340 SVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRRRMIDEGGAPEEIKRIERAKLNSLLAI 399

Query: 368 CEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTGQRYGVGH 427
           CE   CRRQ++LA+F E     CGHCD C+  ++TWD TE A +AL+AV+RTG+R+G GH
Sbjct: 400 CETAGCRRQAILAHFGEAHPGGCGHCDTCLKPVETWDGTEAAIKALAAVYRTGERFGTGH 459

Query: 428 LVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLEGYGGLRL 487
           L+DVL G   EK   FGH  + VFG GK L    W+S+FRQL+A GL+ +D   +G L+L
Sbjct: 460 LIDVLTGSVNEKTERFGHVDMPVFGAGKDLPARTWQSIFRQLLAAGLISVDHAAFGALKL 519

Query: 488 SDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQL--VRAEERDLWEALRTLRRK 545
               R + R E  +  R+D      AKT  + G  PAS+   +   + +L+E LR+ R  
Sbjct: 520 EPEARSVFRRERQVLFRKDRPSSGKAKT--ARGSKPASERSDLAGSDLELFERLRSERLS 577

Query: 546 LAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVL 599
           LA E  VPPYV+FPD+TL+ + + +P    ++  V G+G  K ERYG+AFL V+
Sbjct: 578 LAREMDVPPYVVFPDTTLIALAKRRPRDFEELLDVPGIGESKRERYGEAFLAVI 631