Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 568 a.a., RecQ family ATP-dependent DNA helicase from Parabacteroides merdae CL09T00C40

 Score =  245 bits (625), Expect = 5e-69
 Identities = 137/344 (39%), Positives = 205/344 (59%), Gaps = 4/344 (1%)

Query: 7   RVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVSPL 66
           +VLK  +GYD FR  QA +I+ + +G D L LMPTGGGKS+ FQVP L   G+ +V+SPL
Sbjct: 6   QVLKHYWGYDGFRPGQAEVIDSILSGHDTLALMPTGGGKSITFQVPALANSGICLVISPL 65

Query: 67  IALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRMLDF 126
           +ALM DQV  L + G+ +A ++S +   +  +       G+ K LY++PER+      + 
Sbjct: 66  VALMKDQVKNLQKRGILSAFISSEMPHWEILQQLDNCILGDYKFLYISPERISSELFQEK 125

Query: 127 LRDLD--ISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRTREEI 184
           L+ L   ++L  +DEAHC+SQWG+DFR +Y  +  + +  PHV  IA+TA+A      +I
Sbjct: 126 LKTLSSKVNLLVVDEAHCISQWGNDFRRDYRLIADIRDAIPHVQVIAVTASATAAVVADI 185

Query: 185 VQRLHL-QGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKKVDE 243
            ++LH  +G   F +SF+R N+ + +   +   K++   L    G+A ++Y  +RK V+E
Sbjct: 186 CEQLHFRKGYRIFKTSFERKNLSFVVRKTDNKLKEICHILSAVPGSA-VIYSRTRKGVEE 244

Query: 244 TAAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAHL 303
            A  L + G  A  +HAGL    +   Q  ++     ++VAT AFGMGIDK +VR V H 
Sbjct: 245 YAGKLRAAGISAEYFHAGLDPVLKTERQADWVKGFTRVLVATNAFGMGIDKGDVRVVIHT 304

Query: 304 DLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNS 347
           + P S+EAYYQE GRAGRDG  + A    G QD+  +K+   N+
Sbjct: 305 EFPDSMEAYYQEAGRAGRDGKRAYAVALLGPQDITDIKRRPSNA 348