Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 612 a.a., ATP-dependent DNA helicase RecQ from Dechlorosoma suillum PS

 Score =  661 bits (1705), Expect = 0.0
 Identities = 350/608 (57%), Positives = 433/608 (71%), Gaps = 20/608 (3%)

Query: 5   AQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVS 64
           A  +L  +FGY +FRG Q  I+  VA+GGDALVLMPTGGGKSLC+Q+P LLR G  VV+S
Sbjct: 9   ALEILHRVFGYTAFRGSQGDIVGHVADGGDALVLMPTGGGKSLCYQIPALLRHGCGVVIS 68

Query: 65  PLIALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRML 124
           PLIALM DQV  L +LGV AA LNSTL  +Q +E+  R+  G++ +LY+APERL+  R L
Sbjct: 69  PLIALMQDQVDALTQLGVKAAYLNSTLDWQQVQEVERRVLCGDLDLLYVAPERLLTDRCL 128

Query: 125 DFLRDLD----ISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT 180
             L  L+    ++LFAIDEAHCVSQWGHDFRPEYLQL  L   +P VPRIALTATAD  T
Sbjct: 129 SLLDKLEEDKRLALFAIDEAHCVSQWGHDFRPEYLQLSALHNRYPDVPRIALTATADTAT 188

Query: 181 REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKK 240
           REE+  RL L  A  F++SFDRPNI Y IV K+ PRKQL+AFL   +G AGIVYCLSRKK
Sbjct: 189 REEMRVRLGLTEARVFVASFDRPNIRYLIVEKDNPRKQLLAFLANHKGEAGIVYCLSRKK 248

Query: 241 VDETAAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV 300
           V+ETAA+L SQG PALPYHAGL AE RA NQ  FL EEG+ MVATIAFGMGIDKP+VRFV
Sbjct: 249 VEETAAWLTSQGIPALPYHAGLPAEVRADNQRTFLREEGITMVATIAFGMGIDKPDVRFV 308

Query: 301 AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK 360
           AHLDLPKSLEAYYQETGRAGRDG P++AWMAYGLQD+V+ +  +++S   E  KR+E  K
Sbjct: 309 AHLDLPKSLEAYYQETGRAGRDGEPAEAWMAYGLQDVVLQRSRIEDSVAPEEQKRLEAQK 368

Query: 361 LDAMLALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTG 420
           L+A+LA  E  RCRR  LL YF E  E PC +CD C+   + WD T  A++ALS V+RTG
Sbjct: 369 LNALLAYAESPRCRRVVLLDYFGEASE-PCNNCDVCLTPPELWDGTVAAQKALSVVYRTG 427

Query: 421 QRYGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLE 480
           QR+GV HL+DVL GK ++KV+ +GH+ L  FGVG  L +  WR++FRQLVA G++  DL 
Sbjct: 428 QRFGVVHLIDVLRGKVSDKVKQWGHDALPTFGVGADLDDGAWRAVFRQLVAGGMLTADLA 487

Query: 481 GYGGLRLSDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQLVRA---------E 531
            +G ++L+D+ RP+LRGE TLQ+RR +     A+   S GGS  S+  RA         E
Sbjct: 488 EHGAMKLTDAARPVLRGEQTLQMRRHV-----ARKGGSGGGS-KSRSERAPTKLDDMTLE 541

Query: 532 ERDLWEALRTLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERY 591
           ++ L+E LR  R   A+E  VP YVI  D TL E+   +P +   +  +SG+G  KLERY
Sbjct: 542 DQSLFEDLRQWRAATAKEQGVPAYVILHDKTLKELAEERPTTRDQLMNISGMGTAKLERY 601

Query: 592 GQAFLEVL 599
           G   L ++
Sbjct: 602 GDDLLGII 609