Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 608 a.a., DNA helicase RecQ from Klebsiella michiganensis M5al

 Score =  566 bits (1458), Expect = e-165
 Identities = 295/608 (48%), Positives = 414/608 (68%), Gaps = 17/608 (2%)

Query: 5   AQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVS 64
           A++VL++ FGY  FR  Q  II+    G D LV+MPTGGGKSLC+QVP L+  GLTVVVS
Sbjct: 13  AKQVLQETFGYQQFRPGQDTIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVS 72

Query: 65  PLIALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRML 124
           PLI+LM DQV  L   GV+AA LNST + EQQ+E+    R G++++LY+APERL+    L
Sbjct: 73  PLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQIRLLYIAPERLMLDNFL 132

Query: 125 DFLRDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRTREEI 184
           + L   ++S+ A+DEAHC+SQWGHDFRPEY  LGQL +  PH+P +ALTATAD  TR +I
Sbjct: 133 EHLTHWNLSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPHIPFMALTATADDTTRRDI 192

Query: 185 VQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKKVDET 244
           V+ L L      +SSFDRPNI Y ++ K  P  QLM ++ ++RG +GI+YC SR KV++T
Sbjct: 193 VRLLDLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVEDT 252

Query: 245 AAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLD 304
           AA L S+G  A  YHAGL    RA  Q +F  ++  I+VAT+AFGMGI+KPNVRFV H D
Sbjct: 253 AARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 312

Query: 305 LPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHKLDAM 364
           +P+++E+YYQETGRAGRDGLP++A + Y   DM  L++ L+        + IE+HKL+AM
Sbjct: 313 IPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL-QDIERHKLNAM 371

Query: 365 LALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTGQRYG 424
            A  E   CRR  LL YF E  ++PCG+CD C+D  + +D    AR+ALS ++R  QR+G
Sbjct: 372 GAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKALSTIYRVNQRFG 431

Query: 425 VGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLEGYGG 484
           +G++V+VL G + +++R+ GH+KL V+G+G+  +   W S+ RQL+  GLV  ++  +  
Sbjct: 432 MGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQSHEHWVSVIRQLIHLGLVTQNIAQHSA 491

Query: 485 LRLSDSCRPLLRGEVTLQLRRD----LKPQTTAKTSSSSGGSPASQLVRAEERDLWEALR 540
           L+L+++ RP+LRG+VTLQL       LKP+   K   S GG+         +R L+  LR
Sbjct: 492 LQLTEAARPVLRGDVTLQLAVPRIVALKPKAMQK---SFGGN--------YDRKLFAKLR 540

Query: 541 TLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVLN 600
            LR+ +A+E ++PPYV+F D+TL+EM    P++  +M  V+GVG RKLER+G+ F+ ++ 
Sbjct: 541 KLRKAIADEENIPPYVVFNDATLIEMAEQTPLTAGEMLSVNGVGTRKLERFGKEFMALIR 600

Query: 601 -NSGGTDE 607
            +  G DE
Sbjct: 601 AHVDGDDE 608