Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 449 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score = 63.9 bits (154), Expect = 2e-14
 Identities = 83/333 (24%), Positives = 122/333 (36%), Gaps = 30/333 (9%)

Query: 32  GGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVSPLIALMDDQVATL---DELGVSAAALN 88
           G D +    TG GK+L F +P + R    V+ +  +   D +V  L    EL     +  
Sbjct: 38  GKDLMASSKTGSGKTLAFLLPAMQR----VISTRALTKRDPRVLILLPTRELAHQVYSQL 93

Query: 89  STLTAEQQRE----LAGRLRRGEVKMLYLAPERLVQP--RMLDFLRDLDI-----SLFAI 137
             L A  Q +    L G     + K L   P  +V    R+ D L   ++      L  +
Sbjct: 94  RLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKNLFLNGLELLVL 153

Query: 138 DEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIAL--TATADMRTREEIVQRL-----HL 190
           DEA  +   G  F P+   +   A+   H  R  L  +AT D     EI   L     H+
Sbjct: 154 DEADRMLDLG--FAPQLKAINAAAD---HKRRQTLMFSATLDHSEINEIAAALLKNPSHV 208

Query: 191 QGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKKVDETAAFLCS 250
                     D     Y     +     L   L +      I++  +R   +  A+ L +
Sbjct: 209 AIGAAHTEHQDITQRIYLCDHLDHKEALLTRLLSDETHKQVIIFTATRADTERLASKLSA 268

Query: 251 QGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDLPKSLE 310
           QGF        L    R     +F   +  I+V T     G+D  NV  V + D+PK  E
Sbjct: 269 QGFATAALSGELKQAARNQIMDQFARGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAE 328

Query: 311 AYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQM 343
            Y    GR GR G   DA    G +D    K++
Sbjct: 329 EYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKV 361