Pairwise Alignments

Query, 296 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 294 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  143 bits (360), Expect = 5e-39
 Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 1/281 (0%)

Query: 10  LHIGALFFGLTGVFGKLATSASPAIIVFGRATFAVLALALFASLAGPGWQRLSSQDARRL 69
           LH+  L FG T +F KL    S   I F R   A L LAL     G      S QD    
Sbjct: 13  LHLAVLMFGGTALFSKLIP-LSALDITFLRCVVAALVLALLIKFRGKYISLASKQDYLVA 71

Query: 70  LLGGVLLAGHWVSFFIAVKVGGVAIATLGFASFPAFTVILESLLFRERIHRNEAVLVVLV 129
           +  GV+++ HWV++F A+++  VAI  + F ++P  TVI E LL   +I   + +  VLV
Sbjct: 72  IGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLLTGNKIKLMDIISGVLV 131

Query: 130 SIGLILVTPAFDLASEATGGLLWALLSGLLFSLLSLTNRAGSGRLPAVQAALWQNLVVGL 189
            IG++L+ P  +L ++ T G+   ++S +LF+  +L  +    +     A  +Q LV  +
Sbjct: 132 LIGVVLLIPEANLGNDTTLGIAVGIVSAMLFTARNLLQKRYFSQYSGPHAMFYQTLVAAV 191

Query: 190 CLLPFAAPGLADVAALDWLWIALLGIFCTGVAHSLFVASLAVIKARTAAVVFGMEPVYGI 249
            L+P+    L  ++   W  I LLG+  T   H+LF ++L  + A+T  +V  ++P YG 
Sbjct: 192 FLMPWHQTELQTISLETWGLIILLGVVFTAAPHALFTSALRQLSAKTVGLVSCLQPFYGA 251

Query: 250 AVAWAVFAETPTVRMLLGGALIIFAIVLSSRLAAEQPPRQR 290
            +A  +  E   +  L+GG +I+   +  +  + +   R++
Sbjct: 252 MLALVILGEALNLNTLIGGTIIVATAIFETHQSHQSQRRKK 292