Pairwise Alignments

Query, 355 a.a., 23S rRNA pseudouridine 2605 synthase from Pseudomonas putida KT2440

Subject, 230 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 13/236 (5%)

Query: 18  KLQKVLARIGVGSRRDVEAWISQGRIKVNG-VEATLGQRVDLHDAIAVDGKLIKREEAAE 76
           +L + L      SR+DV   ++ GR+ VNG V   + Q + + D I ++G+ ++  +AA 
Sbjct: 2   RLDRYLGNRARLSRQDVRRLVADGRVMVNGKVSQAMDQEIRVFDRIELEGESLQAGKAA- 60

Query: 77  ATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGRLDINTTGLLLFTTDGE 136
              R +M +KP G +    D   R TV D +  P +      GRLD NTTGL+L T DG+
Sbjct: 61  ---RYLMLHKPAGCVSATQDTAHR-TVLDLIDEPDKQDLHIAGRLDFNTTGLMLLTNDGQ 116

Query: 137 LANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAKFTDIQKAPGGEGF--N 194
            + RL  P+    + Y V    E+D   ++    G+       +F ++   P       +
Sbjct: 117 WSRRLTQPTSLQGKVYLVETENEIDPACVDVFARGMYF-----RFENLTTLPAELVILAS 171

Query: 195 HWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMGRWREMTQGEI 250
                 + EGR  +V+R++      V+ L R   GP+ L+  L  GR+R +T  EI
Sbjct: 172 DKARLTLHEGRYHQVKRMFGHFNNKVTALHRESMGPLMLDPALEPGRYRSLTDHEI 227