Pairwise Alignments

Query, 355 a.a., 23S rRNA pseudouridine 2605 synthase from Pseudomonas putida KT2440

Subject, 243 a.a., ribosomal large subunit pseudouridine synthase B from Synechococcus elongatus PCC 7942

 Score =  149 bits (377), Expect = 6e-41
 Identities = 91/241 (37%), Positives = 134/241 (55%), Gaps = 17/241 (7%)

Query: 17  EKLQKVLARIGVGSRRDVEAWISQGRIKVNGVEATLGQRVDL-HDAIAVDGKLIKREEAA 75
           E+LQK+L+++GV SRR  E WI QGR+ +NG  A +GQ+ DL  D I +DGK ++ +   
Sbjct: 3   ERLQKILSQLGVASRRQAEQWIQQGRVTINGRVAEIGQQADLKRDRIHLDGKRLRPKHRP 62

Query: 76  EATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGRLDINTTGLLLFTTDG 135
           EA  R ++ +KP G + T  DP+ R TV D +          +GRLD +++GLLL   DG
Sbjct: 63  EA--RYLLLHKPVGVVSTCRDPQRRRTVIDLVDPEFRPGLHPVGRLDTDSSGLLLLCNDG 120

Query: 136 ELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAKFTDIQKAPGGEGFNH 195
           EL  ++ HP + +++ Y V V G     ++E  ++GV L+       D Q  P G    H
Sbjct: 121 ELTYQISHPRFHIEKTYRVWVEGHPPASVLEHWRSGVWLD-------DYQTLPAGVRILH 173

Query: 196 ------WYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMGRWREMTQGE 249
                     ++ EGRNR++RR+ E  G  V RL RV  GP+ L S L  G +R +T  E
Sbjct: 174 DRAESTLLEVILHEGRNRQIRRVAEQLGHPVLRLTRVAIGPLRLGS-LQPGEYRSLTAAE 232

Query: 250 I 250
           +
Sbjct: 233 V 233