Pairwise Alignments

Query, 355 a.a., 23S rRNA pseudouridine 2605 synthase from Pseudomonas putida KT2440

Subject, 573 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  166 bits (421), Expect = 1e-45
 Identities = 130/365 (35%), Positives = 180/365 (49%), Gaps = 34/365 (9%)

Query: 17  EKLQKVLARIGVGSRRDVEAWISQGRIKVNGVEA-TLGQRVDLHDAIAVDGKLIKREEAA 75
           +++ K+L+R GV SRRDVE  I +GR+ +NGV   T      L D I VDG  I+  E  
Sbjct: 47  QRISKILSRAGVASRRDVERMIMEGRVSLNGVVLDTPVVNATLADRIEVDGHPIRGIERT 106

Query: 76  EATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGRLDINTTGLLLFTTDG 135
               R+ +Y+KP G + T  DPEGRPTVF+ LP     R +++GRLDINT GLLL T DG
Sbjct: 107 ----RLWLYHKPGGLVTTNADPEGRPTVFENLPEELP-RVLSVGRLDINTEGLLLLTNDG 161

Query: 136 ELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAKFTDIQKAPGGEGFNH 195
            LA  L  PS    R Y VR  GE+D E ++RLK G+ + DG             +G N 
Sbjct: 162 GLARVLELPSTGWLRRYRVRAHGEIDQEALDRLKEGIAV-DGVLYGAIEATLDRVQGSNV 220

Query: 196 WYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMGRWREM---------- 245
           W    + EG+NRE++ +  + G+ V+RL R+ +GP F   +LP+G+ +E+          
Sbjct: 221 WITMGLREGKNREIKNVLGALGLDVNRLIRISYGP-FQLGELPIGQVQEIRGRTLREQLG 279

Query: 246 ------TQGEIDILA---AEVGLQPVALPAMKLKAK--DKMERLQRKSTRPLGRGERVR- 293
                 ++   D           +P A PA   KA+   K E+ + K  R L R +  R 
Sbjct: 280 PRLIADSKANFDAPIYNDQPAAAEPEAEPADHGKAEWGSKREKAEDKRERALARLDTRRD 339

Query: 294 NLRPAHEGAATG---ERPARQPREEAPRKPTRGSTVAERPSEMRKRPGKPDGDKPAGRGR 350
           + RP+  G + G   ERPAR P     R          RP+  +K     D   P G  R
Sbjct: 340 DGRPSERGRSRGKPEERPARPP-VRRNRSSNVWMAPGARPTVEKKPKAAEDDLSPKGARR 398

Query: 351 GKPRG 355
               G
Sbjct: 399 APAEG 403