Pairwise Alignments

Query, 355 a.a., 23S rRNA pseudouridine 2605 synthase from Pseudomonas putida KT2440

Subject, 236 a.a., pseudouridine synthase, Rsu (RefSeq) from Shewanella sp. ANA-3

 Score = 90.1 bits (222), Expect = 5e-23
 Identities = 75/246 (30%), Positives = 117/246 (47%), Gaps = 19/246 (7%)

Query: 18  KLQKVLARIGVGSRRDVEAWISQGRIKVNGVEATLGQRVDLH------DAIAVDGKLIKR 71
           +L K LA+ G+ SRR+    I  GRI +NG  A     V         D++ +D K I  
Sbjct: 2   RLAKYLAQCGISSRREACRLIEAGRISLNGKIAKHTDAVHFDADGQCLDSLCLDEKPISG 61

Query: 72  EEAAEATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGRLDINTTGLLLF 131
            EA        ++NK  G  C   D + + ++   LP     R   +GRLD ++ GLLL 
Sbjct: 62  AEALSYW----IFNKAVGTDCRLLDAD-KSSLLHLLPTTP--RLYPVGRLDKDSRGLLLL 114

Query: 132 TTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAKFTDIQKAPGGE 191
           T DGEL ++LMHPS+   + Y V++    +D  I ++ +GV  ++       + +     
Sbjct: 115 TNDGELTHKLMHPSFAHSKTYHVQLDRPFNDAFIAQMASGVQYKEVRTLPCQVTRLSADR 174

Query: 192 GFNHWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMGRWREMTQGEID 251
                +  V+ +G NR++RR+  + G  V  L+RV    + L S L  G  R ++  EI 
Sbjct: 175 -----FEIVLTQGLNRQIRRMSNALGYKVIDLQRVALMTLTLAS-LAEGEMRPLSPEEIT 228

Query: 252 ILAAEV 257
            L A V
Sbjct: 229 TLKAAV 234