Pairwise Alignments

Query, 519 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  201 bits (511), Expect = 5e-56
 Identities = 109/248 (43%), Positives = 148/248 (59%), Gaps = 1/248 (0%)

Query: 197 RKQELRGFDSIFQSSRVMAAVVREARRMAPLDAPLLIEGETGTGKELLARACHLASPRGQ 256
           R  E      I   +  M  V R   R++     +LI GE+GTGKEL+A A H  SPR Q
Sbjct: 131 RPSENYSAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAQ 190

Query: 257 SPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTAGGTLFLDGVGEMSPRL 316
            P +ALN A +P+ + E+ELFG+  GAF GA    + G  E   GGTLFLD +G+M   +
Sbjct: 191 KPFIALNMAAIPKDLIESELFGHEKGAFTGANTV-RQGRFEQANGGTLFLDEIGDMPLDI 249

Query: 317 QVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGEFRQDLYHRLNVLSLHI 376
           Q +LLR L DG F RVG    + +DVR++ AT  +L +L  +G+FR+DL+HRLNV+ +HI
Sbjct: 250 QTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHI 309

Query: 377 PPLRECMDGLEGLVQHFLDQASRQIGCAMPRLAPAAMDKLGQYHWPGNVRQLENVLFQAV 436
           P LRE    +E L +HFL  A++++G  M  L P  +D L +  WPGNVRQLEN+     
Sbjct: 310 PSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLT 369

Query: 437 SLCDGGVV 444
            +  G  V
Sbjct: 370 VMASGSEV 377