Pairwise Alignments

Query, 519 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 647 a.a., ATPase AAA from Klebsiella michiganensis M5al

 Score =  205 bits (522), Expect = 4e-57
 Identities = 111/229 (48%), Positives = 146/229 (63%), Gaps = 1/229 (0%)

Query: 223 RMAPLDAPLLIEGETGTGKELLARACHLASPRGQSPLMALNCAGLPESMAETELFGYGPG 282
           ++AP +A +LI GETGTGKE++AR  H  SPR Q P +A+NC  L ES+AE ELFG+  G
Sbjct: 27  KLAPTEATVLIVGETGTGKEVVARYLHHHSPRRQRPFLAVNCGALSESLAEAELFGHEKG 86

Query: 283 AFEGARAEGKLGLLELTAGGTLFLDGVGEMSPRLQVKLLRFLQDGCFRRVGSDEEVYLDV 342
           AF GA  +   G  E   GGTL LD +GE+S  LQVKLLR LQ+    RVGS + V +DV
Sbjct: 87  AFTGA-VQSHPGWFEAAEGGTLLLDEIGELSLALQVKLLRVLQEREITRVGSRKAVKVDV 145

Query: 343 RVICATQVDLSELCARGEFRQDLYHRLNVLSLHIPPLRECMDGLEGLVQHFLDQASRQIG 402
           RVI AT VDL +      FR+DLY+RLN+  + +PPLR+    +  L  HFL   +R++G
Sbjct: 146 RVIAATHVDLMQAIRERRFREDLYYRLNIAIVPLPPLRQRRQDIPVLADHFLSLYARRLG 205

Query: 403 CAMPRLAPAAMDKLGQYHWPGNVRQLENVLFQAVSLCDGGVVKSEHIRL 451
             + RLAP  + +L +Y WPGN+R+LEN L  AV L     +    +RL
Sbjct: 206 RPIRRLAPETLARLMEYPWPGNIRELENTLHNAVLLSKEEEIGPAQLRL 254