Pairwise Alignments

Query, 519 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 690 a.a., transcriptional regulator FhlA from Klebsiella michiganensis M5al

 Score =  213 bits (541), Expect = 2e-59
 Identities = 130/330 (39%), Positives = 197/330 (59%), Gaps = 16/330 (4%)

Query: 191 ERIYNVRKQELRGFDSIFQSSRVMAAVVREARRMAPLDAPLLIEGETGTGKELLARACHL 250
           E++ NV  +    F  I   S  M +V+++   +A  D+ +LI GETGTGKEL+ARA H 
Sbjct: 369 EQLNNVESE----FGEIIGRSEAMNSVLKQVEMVAHSDSTVLILGETGTGKELIARAIHN 424

Query: 251 ASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTAGGTLFLDGVG 310
            S R    ++ +NCA +P  + E++LFG+  GAF GA A+ ++G  EL    +LFLD VG
Sbjct: 425 LSGRNSRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQ-RIGRFELADKSSLFLDEVG 483

Query: 311 EMSPRLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGEFRQDLYHRLN 370
           +M   LQ KLLR LQ+  F R+GS++ ++ DVR+I AT  DL ++ A  EFR DLY+RLN
Sbjct: 484 DMPVELQPKLLRVLQEQEFERLGSNKLIHTDVRLIAATNRDLKQMVADREFRSDLYYRLN 543

Query: 371 VLSLHIPPLRECMDGLEGLVQHFLDQASRQIGCAMPRLAPAAMDKLGQYHWPGNVRQLEN 430
           V  +H+PPLRE  D +  LV+ F  + +R++G  +  +    +  L +  WPGNVR+LEN
Sbjct: 544 VFPIHLPPLRERPDDIPLLVKAFTFKIARRLGRNIDSIPAETLRLLSRMEWPGNVRELEN 603

Query: 431 VLFQAVSLCDGGVVKSEHIRLPDYGVR-QPLGEFSL--EG-DLSQIVGRFEKAVLESLMG 486
           V+ +AV L  G V++   + LP+  +  QPL    L  EG D  Q++ R    VL+   G
Sbjct: 604 VIERAVLLTRGSVLQ---LSLPEMNIEPQPLAAEVLPEEGEDEYQLIVR----VLKESNG 656

Query: 487 EFPSSRALGKRLGVSHTTIANKLRDYSLNK 516
                +   +RLG+  TT+ ++++   ++K
Sbjct: 657 VVAGPKGAAQRLGLKRTTLLSRMKRLGIHK 686