Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  186 bits (471), Expect = 5e-52
 Identities = 111/255 (43%), Positives = 148/255 (58%), Gaps = 9/255 (3%)

Query: 3   KLALLGALALSVFSLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEEMK 62
           K  LL A A  +    + AAEK L+IG E AYPPF      G + GFD DI +ALC +MK
Sbjct: 5   KKILLTAAASLIIGTQAFAAEK-LRIGTEGAYPPFNLIDASGKVVGFDLDISHALCAKMK 63

Query: 63  TKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGTTV 122
            +C  V  ++DG+IPAL   K D + +SMS+T++RK +VDFT  YY    + V       
Sbjct: 64  VECEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKNVEF 123

Query: 123 SDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVADA 182
                 LKGK IG QR +I   + ++ L  +   +  Y TQ   YLD+A+GR+DG +AD 
Sbjct: 124 QTDEGYLKGKVIGAQRATIAGTWLEDNLD-RVVDIKLYDTQENAYLDLASGRVDGILAD- 181

Query: 183 TLLEDGFLKTDAGKGFAFVG-PAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRANG 241
           T ++  +LK+DAGK F F G P F D     D I IAVRKG+    +R+N A+  I A+G
Sbjct: 182 TFVQWEWLKSDAGKNFEFKGEPVFDD-----DKIAIAVRKGNDELRERLNKALAEIIADG 236

Query: 242 KYKEIESKYFNFDIY 256
            YK+I  KYF F IY
Sbjct: 237 TYKQINDKYFPFSIY 251