Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (461), Expect = 7e-51
 Identities = 97/251 (38%), Positives = 147/251 (58%), Gaps = 10/251 (3%)

Query: 1   MKKLALLGALALSVFSLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEE 60
           MKK+ L   + L      S AA++ +K  +EA Y PF +   +  I GFD D+ NALC++
Sbjct: 1   MKKILLASLIGLVS---ASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQ 57

Query: 61  MKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGT 120
           ++ KC++  Q FD LIPALK ++ DA +S+M IT+ R + V+F+  YY   A  V   G 
Sbjct: 58  LEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGK 117

Query: 121 TVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVA 180
               +   LKGK++GVQ GS H  F  E L       VPY +  + ++D+  GR+D    
Sbjct: 118 VADQA--ALKGKRVGVQNGSTHQSFLLEQL--SDVVAVPYSSYQDAFIDMKNGRIDSVFG 173

Query: 181 DATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRAN 240
           D  ++ + F         A+VG   T+A+YFG+G GIAV K ++A +D++NAA++A++ N
Sbjct: 174 DTAVVAEWF---KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKEN 230

Query: 241 GKYKEIESKYF 251
           G+Y  I +KYF
Sbjct: 231 GEYAAIFNKYF 241