Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 260 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  185 bits (469), Expect = 9e-52
 Identities = 104/259 (40%), Positives = 149/259 (57%), Gaps = 6/259 (2%)

Query: 1   MKKLALLGALALSVFSLVSQAAEKPLKIGIEAA-YPPFAFKQPDGSIAGFDYDIGNALCE 59
           +K +AL  ALA++     + A+ + +K+GI A  YPPF      G+  G++ +   A+C 
Sbjct: 5   LKLVALAAALAITG---AATASAQQVKVGIAAEPYPPFTSPDASGNWEGWEIEFMKAMCA 61

Query: 60  EMKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDG 119
           E K  C      +DG+IPAL  +KID I+ SMSIT +R K++DF+ +YY TP  ++   G
Sbjct: 62  EAKLDCVVTPVAWDGIIPALTSKKIDMIIGSMSITAERLKTIDFSDKYYNTPTGIIGAKG 121

Query: 120 TTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTV 179
             +  + + L GK IGVQ  ++H  +A +     G  V  Y TQ+E   D+AAGR+D   
Sbjct: 122 DDIKPTPEGLAGKTIGVQVSTVHQAYAMKHFAPAGVEVKEYQTQDEANQDLAAGRVDAVQ 181

Query: 180 ADATLLEDGFLKTDAGKGFA-FVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIR 238
           ADA  L D FLK+D GK    + G    D    G G+G+ +RKG+    +++NAAI AIR
Sbjct: 182 ADAIAL-DAFLKSDQGKQCCDYKGEVAEDVDVIGPGVGVGLRKGETELKEKVNAAIKAIR 240

Query: 239 ANGKYKEIESKYFNFDIYG 257
            NG Y     KYF+FDIYG
Sbjct: 241 ENGTYDAFSKKYFDFDIYG 259