Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 260 a.a., L-lysine ABC transporter, substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score =  212 bits (539), Expect = 7e-60
 Identities = 116/258 (44%), Positives = 164/258 (63%), Gaps = 5/258 (1%)

Query: 2   KKLALLGALALSVFSL-VSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEE 60
           ++LA   + A+ V    V+ A  + + IG E AYPPF   + DG++ GFD DI  ALCEE
Sbjct: 5   RRLAATASAAVFVLMAGVAMAEGEKVVIGTEGAYPPFNNLESDGTLTGFDIDIAKALCEE 64

Query: 61  MKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVM-KDG 119
           MK +CT+V Q++DG+IPAL  +K DAI++SMSIT++RK+ VDFT +YY TP  +V+ KD 
Sbjct: 65  MKAECTFVTQDWDGIIPALIAKKFDAIVASMSITEERKQQVDFTNKYYNTPPAIVVPKDS 124

Query: 120 TTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTV 179
                +   L GK +G Q  + H  +A+  +  K + V  Y T +E  LD+A GR+D  +
Sbjct: 125 PITEATAAALSGKALGAQGSTTHSNYAEAHM--KESEVKLYPTADEYKLDLANGRIDAAI 182

Query: 180 ADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRA 239
            D  +L + +LKT+ G     +G    D    G+G GIA+RKGD A  +++N AI+AIRA
Sbjct: 183 DDVVVLSE-WLKTEDGACCKLLGTLPIDPVINGEGAGIAIRKGDDALREKLNKAIEAIRA 241

Query: 240 NGKYKEIESKYFNFDIYG 257
           NGKYK+I  KYF FD+YG
Sbjct: 242 NGKYKQINEKYFPFDVYG 259