Pairwise Alignments

Query, 229 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 232 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  182 bits (461), Expect = 6e-51
 Identities = 93/222 (41%), Positives = 146/222 (65%), Gaps = 1/222 (0%)

Query: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDL 62
           +GYG +++ GA +T++L L +++  +VLGLIG  L+LS       +G+ Y+ + RG+P+L
Sbjct: 4   QGYGDLLITGAAMTIKLVLGAVSFGLVLGLIGTTLKLSRNALARAVGNAYTDLFRGLPEL 63

Query: 63  VLILLIFYGGQDIIN-RVAPLLGYEDYIDLNPLIAGIGTLGFIFGAYLSETFRGAFLGIP 121
           +++L+++YG + ++   V  +L  +  + ++P + G+ +LG IFGAY SE FRGA L IP
Sbjct: 64  LVVLIMYYGAEALVRWLVNDVLALDVAVSISPYVGGVLSLGLIFGAYASEVFRGAILAIP 123

Query: 122 KGQAEAGVAYGMSPRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKA 181
           +G  EA  A+GM P   + RI +PQ+ R+A+PG  N +LV  K TAL+S +GL ++M  A
Sbjct: 124 RGHVEAARAFGMGPVLTYRRIILPQVWRVALPGLGNLFLVSLKDTALVSAIGLNELMRSA 183

Query: 182 KQAADATREPFTFFLAVAALYLVLTSVSLLALKYLERRYSVG 223
             A  +TR+ FTF LA A LYL +T VS+  +  LERR + G
Sbjct: 184 NIAGRSTRDYFTFLLAAAFLYLAMTMVSMAVIALLERRANRG 225