Pairwise Alignments

Query, 232 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score =  121 bits (303), Expect = 1e-32
 Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 10/209 (4%)

Query: 5   YNVVWEALPMYFGGLLTTLKLLAISLFFGLLAAIPLGLMRVSR-QPVVNLAAWLYTYVIR 63
           + +V++ +P     +  TLK+  +S    ++ A+ +G  R       ++L    Y  V R
Sbjct: 3   FYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFR 62

Query: 64  GTPMLVQLFLIYYGLAQFEAVRESIFWPLLSSATFCACLAFGINTSAYTAEIIAGSLKAT 123
           GTP+L+QLF IYYGL             +  S+TF A L   +N  AY +EII  ++++ 
Sbjct: 63  GTPLLIQLFFIYYGLPSIG---------ITMSSTFAAVLGLSLNGGAYISEIIRAAIQSV 113

Query: 124 PHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGA 183
           P G+ EAA+++GM +++    I+LP A R  +P   N    +L+ +SL S++ + ++T  
Sbjct: 114 PVGQFEAAESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRI 173

Query: 184 ARTVNAQYYLPFEAYITAGVFYLCLTFIL 212
            + +  +   PFE Y+T G+ YL L  I+
Sbjct: 174 GQLIYTRTSRPFEIYLTIGLIYLILVSII 202