Pairwise Alignments

Query, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 311 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas fluorescens FW300-N2E2

 Score =  118 bits (295), Expect = 2e-31
 Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 1/222 (0%)

Query: 89  LKQLARSGCLIGGLSAGVYPLAMLGLLDGYRAAVHWRWQDDFAERFPK-VIATSHLFDWD 147
           L+  A+     G +  G + L   GLLDGYR   HW + +   +RFPK ++ T  +F  D
Sbjct: 88  LRAAAQRATRYGSICTGAFVLGEAGLLDGYRVTTHWHYTERLIQRFPKSLVETDKIFLQD 147

Query: 148 RDRLTACGGMAVTDLLLAVLARDHGAELAGAVSEELVVERIREGGERQRIPLQNRLGSSH 207
           R  +T+ G  A  DL L+++A+DHG ++A  V++ L+V   R+GG+ Q  P    + +  
Sbjct: 148 RRLITSGGVTAGIDLALSIVAQDHGRKVALDVAKVLLVVMKRQGGQAQFSPSVAAVSTQE 207

Query: 208 PKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRVPSQYYLELRLNKARQ 267
             +T+    +  ++EEP T + +A    +S R   R+F + +   P ++    R+++ARQ
Sbjct: 208 SAITRVQNHVMEHLEEPFTIERMAALAAMSARHFARVFAREVKMTPMEFLQGARIDRARQ 267

Query: 268 MLMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGATPREDRNQ 309
           +L  T   +  +    GF S  H    +    G TP + R Q
Sbjct: 268 LLETTDLPLKTVAFRSGFGSVRHMRFLFGEKLGLTPVQYRQQ 309