Pairwise Alignments

Query, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 319 a.a., transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

 Score =  105 bits (261), Expect = 2e-27
 Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 5/229 (2%)

Query: 76  EPPAAMGAAFSAALKQLARSGCLIGGLSAGVYPLAMLGLLDGYRAAVHWRWQDDFAERFP 135
           EPP+    A   AL++    G  +  + +G + LA  GLLDG  A  HWR+ D+ A+ FP
Sbjct: 85  EPPSE---ALLDALRRAHARGARLLSICSGAFVLAAAGLLDGLGATTHWRYTDELAKSFP 141

Query: 136 KVIATSHLFDWDRDR-LTACGGMAVTDLLLAVLARDHGAELAGAVSEELVVERIREGGER 194
            V     +   D  + +T+ G  A  D  L ++ARD+G ++A  V+  LV+   R GG+ 
Sbjct: 142 AVRVDPDVLYVDSGQVITSAGSAAGIDACLHLVARDYGVQVANTVARRLVMSPQRTGGQA 201

Query: 195 QRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRVPS 254
           Q IP      +    L+  +      + EPL   E+A    +S R   R F Q     P 
Sbjct: 202 QFIP-SPVSRTPRSDLSSVMQWARERLHEPLGVRELASQAAMSERTFLRHFTQACGVSPK 260

Query: 255 QYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGATP 303
            +    RL +AR++L  T  +   I   CG+ S   F  A+R+  G  P
Sbjct: 261 AWLQHERLARARELLESTGDNTDNIAQLCGYRSVESFRVAFRSVVGLAP 309