Pairwise Alignments

Query, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 324 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  142 bits (359), Expect = 9e-39
 Identities = 104/316 (32%), Positives = 152/316 (48%), Gaps = 7/316 (2%)

Query: 4   QRIGFLIWPSTRPLTLALAEEVLLVAQRVHPDVVYELVFLQ---AEPAQEGAWRLPGEPW 60
           QRIGFL+  +   ++ A A E L  A  +    +Y++V L       A      +     
Sbjct: 11  QRIGFLLVRNFALMSYASATEPLRAANLLAGRPLYQIVPLAPGGGTVASSSGLSVGCADL 70

Query: 61  TGRLEGCHKLFLLADEPPA--AMGAAFSAALKQLARSGCLIGGLSAGVYPLAMLGLLDGY 118
               E CH +F+ A   P   A  +A    L++L+R G  IGG+S+G + LA  GLLD  
Sbjct: 71  ESEGESCHTVFVCAGGEPTDWADTSASHTTLRRLSRLGIRIGGISSGAFVLAAAGLLDNR 130

Query: 119 RAAVHWRWQDDFAERFPKVIATSHLFDWDRDRLTACGGMAVTDLLLAVLARDHGAELAGA 178
              +HW       E FP +      F  D    T  GG+A  D++ A++A   G + A  
Sbjct: 131 DFTIHWEHAPALKEAFPHLNPRHARFVLDGGIATCGGGVAPLDMMHAMIAERLGTDFARR 190

Query: 179 VSEELVVERIREGGERQRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHVCVSR 238
           VS+  +   + E    QR     R G++HP L   +  ME  IE PL    +A+   VS 
Sbjct: 191 VSDWYLHAAVAEPAAPQRGSAAERFGTNHPALLAVLEKMETAIERPLDRTAMARLAGVSP 250

Query: 239 RQLERIFKQYLNRVPSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSAYRNF 298
           R L+R+F+++        Y E+RL  AR++L Q+  SI +I  + GFSS  HFS+A++  
Sbjct: 251 RHLDRLFREHRGTGFLDTYREIRLRHARRLLQQSPLSIPEIAYATGFSSPAHFSNAFKRL 310

Query: 299 FGATPREDRNQRRSSS 314
           F  TP   R  RRS S
Sbjct: 311 FSQTPGSLR--RRSGS 324