Pairwise Alignments

Query, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 342 a.a., putative HTH-type transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  112 bits (281), Expect = 1e-29
 Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 2/198 (1%)

Query: 116 DGYRAAVHWRWQDDFAERFPKVIATSHLFDWDRDRLTACGGMAVTDLLLAVLARDHGAEL 175
           +G +   HW   +   ER         L   D   +T  G  A  D++LA++ +   A  
Sbjct: 136 EGAQHTTHWENANLMRERIGLFDTNFALASEDGQVVTCAGMGATVDIVLALIGQLTTAAA 195

Query: 176 AGAVSEELVVERIREGGERQRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHVC 235
              V+  L+ +++R+    Q         +    L QA+ +M+ +IE+PL  +EI  H+ 
Sbjct: 196 QVTVANILLHDKVRDFASLQPFSGVKPTITGDADLDQAIHVMQEHIEDPLPINEIVDHLG 255

Query: 236 VSRRQLERIFKQYLNRVPSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSAY 295
           +S R LER FK +L   P+ +Y E+RLNKA  +L+ T+ S+ +IGL+CGFS+G  FS+ Y
Sbjct: 256 ISTRSLERKFKTFLGTTPNGFYREMRLNKANNLLLNTTMSVREIGLACGFSNG--FSTLY 313

Query: 296 RNFFGATPREDRNQRRSS 313
           + FFG TP   R  RR S
Sbjct: 314 KAFFGITPFALRKSRRVS 331