Pairwise Alignments

Query, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 319 a.a., transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Dechlorosoma suillum PS

 Score =  108 bits (271), Expect = 1e-28
 Identities = 77/235 (32%), Positives = 111/235 (47%), Gaps = 5/235 (2%)

Query: 74  ADEPPAAMGAAFSAALKQLARSGCLIGGLSAGVYPLAMLGLLDGYRAAVHWRWQDDFAER 133
           A+ PP A+  A  AA     R G  + GL  G Y LA  GLLDG RA  HW +  DFA R
Sbjct: 80  AERPPQAVLDALVAA----HRRGAQVVGLCLGAYVLAEAGLLDGRRATTHWEFAADFARR 135

Query: 134 FPKV-IATSHLFDWDRDRLTACGGMAVTDLLLAVLARDHGAELAGAVSEELVVERIREGG 192
           +P V +    L+  + + LT+ G  A  D  L +L +  GA  A  V+  LV    R+GG
Sbjct: 136 YPAVTLDPGVLYVDEGNLLTSAGTAAGIDACLHLLRQRCGATAANRVARRLVTPPHRQGG 195

Query: 193 ERQRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRV 252
           + Q IP      +   +L   +  + A++E+P   + +A    +SRR   R F+Q     
Sbjct: 196 QAQYIPQPLPASAGDSRLAALLDRVRASLEQPHDLNSLAAQALMSRRTFTRHFRQLTGAT 255

Query: 253 PSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGATPREDR 307
             Q+ L  RL  A+++L  T   I +I    GF S       +R   G +P + R
Sbjct: 256 VGQWLLGERLGLAQRLLESTDHGIERIAQLAGFGSPEALRLHFRRSLGVSPSQWR 310