Pairwise Alignments

Query, 874 a.a., Alanine--tRNA ligase from Pseudomonas putida KT2440

Subject, 874 a.a., alanyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1100 bits (2845), Expect = 0.0
 Identities = 544/872 (62%), Positives = 669/872 (76%), Gaps = 3/872 (0%)

Query: 3   SAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAVS 62
           +A +R AFL FF   GH  V SSSL+P NDPTLLFTNAGMNQFKD FLG +KR+YTRA +
Sbjct: 5   TAALRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRSYTRATT 64

Query: 63  SQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEQWLNLP 122
           +Q+CVRAGGKHNDL+NVGYTARHHTFFEMLGNFSFGDYFK DAI F WTFLT  + L LP
Sbjct: 65  AQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFGWTFLT--EVLMLP 122

Query: 123 KEKLWVTVYATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFWTMGDTGPCGPCTE 182
           KE+L VT+Y TDDEA++IW K++GV AE ++RIGDNKGAPYASDNFW MGDTGPCGPCTE
Sbjct: 123 KERLCVTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTE 182

Query: 183 IFYDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERV 242
           IFYDHG  IWGG PGSPEEDGDR+IEIWN VFMQ+NR A G + PLP PSVDTGMG+ER+
Sbjct: 183 IFYDHGDHIWGGRPGSPEEDGDRFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERI 242

Query: 243 SAVLQHVHSNYEIDLFQNLLAAAAKAIGCSNDGQASLKVVADHIRSCGFLIADGVLPSNE 302
           +A++Q VHSNYEID+F+ L+A AA+ IG ++    SL+V+ADHIRSC FL+ADGV+PSNE
Sbjct: 243 AAIMQGVHSNYEIDIFRALIAKAAEIIGVADLSNKSLRVIADHIRSCAFLVADGVMPSNE 302

Query: 303 GRGYVLRRIIRRACRHGNKLGAKGSFFYQIVAALAAEMGEAFPELKSQQAHIERVLKAEE 362
           GRGYVLRRIIRRA RHGNKLGA  +FFY++V  L   MG+A   L   Q  +E+ LKAEE
Sbjct: 303 GRGYVLRRIIRRAVRHGNKLGATEAFFYKLVPTLIDVMGDAAKGLAETQVIVEKALKAEE 362

Query: 363 EQFAKTLEQGLRILEQDLAQLKGDVVPGDVVFKLYDTYGFPMDLTADIARERELTIDEAG 422
           EQFA+TLE+GL IL+  L +L+GD + G+ VFKLYDTYGFP+DLTAD+ RER + +DEAG
Sbjct: 363 EQFARTLERGLGILDSALNELQGDTLDGETVFKLYDTYGFPVDLTADVCRERNIIVDEAG 422

Query: 423 FEREMDAQRERARSASAFGMDYNSLVKVDSATEFLGYDATEGQGKIIALYKDGQSVDQLG 482
           FE  M  QR RA++A  FG DYN+ +K+D+ T F GY    G  K+ ALY +G+SV  + 
Sbjct: 423 FEAAMAEQRSRAQAAGNFGADYNAALKIDAETAFCGYSELTGNAKVTALYLNGESVPAIN 482

Query: 483 EGEEGVVVLDRTPFYAESGGQVGDTGFLQAGAARFDVRDTTKTGGAFLHHGVVTSGALVI 542
            G++ VVVLD TPFYAESGGQVGD G L A    F V DT K G A  H G +T+G+L +
Sbjct: 483 TGDDAVVVLDVTPFYAESGGQVGDKGVLMAQGIEFTVNDTQKFGQASGHKGTLTAGSLSV 542

Query: 543 GSPVEAKVDADVQHATSLNHSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAV 602
           G  +EAKVD  ++H T LNHS THLLH ALRQVLG HV QKGSLVD +RLRFDFSHFEAV
Sbjct: 543 GQVLEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEAV 602

Query: 603 KPEQIKQLEDIVNREIRKNTPVETELTDIETAKAKGAMALFGEKYGDTVRVLSMGGDFSV 662
           KP ++KQ+E++VN +IR+N  ++     I+ AK KGAMALFGEKY   VRV++M GDFS+
Sbjct: 603 KPFELKQVEELVNTQIRRNHELKVAEMAIDEAKEKGAMALFGEKYDSQVRVVTM-GDFSI 661

Query: 663 ELCGGIHAKRTGDISLFKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQVKEAAQLVKG 722
           ELCGG H  RTGDI LFKI SEGG+A+GVRRIEAVTGAAA+AY+   + +++EAA L+K 
Sbjct: 662 ELCGGTHVGRTGDIGLFKITSEGGIAAGVRRIEAVTGAAAMAYVAQQQAELEEAASLLKA 721

Query: 723 NRDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGAKVLAARLDGQDG 782
           +  +++ KL   L++ +QLEK+++QL+ K A+AA  DL+  AV V G  VL  +L+G + 
Sbjct: 722 DAHSVVTKLKVQLDKMKQLEKEMQQLKDKLAAAASADLAGDAVVVNGVNVLIKKLEGVEA 781

Query: 783 KALLALVDQLKNKLGHAVILLGSEHEGKVVLVAGVTKDLSSQLKAGDLMKQAAAAVGGKG 842
            AL  L D+LK KL  A+I+LG   EGKV L+AGV+ DL +++KAG+L+   A  VGGKG
Sbjct: 782 GALRGLQDELKQKLKSAIIVLGVAQEGKVNLIAGVSNDLIAKIKAGELVAMVATQVGGKG 841

Query: 843 GGRPDMAQGGGVDVAALDQALALAVPFAEQGL 874
           GGRPDMAQ GG     LD AL+  +P+  + L
Sbjct: 842 GGRPDMAQAGGSQPENLDAALSQVLPWITERL 873