Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 440 a.a., Outer membrane porin, OprD family from Pseudomonas fluorescens FW300-N2E2

 Score =  314 bits (805), Expect = 3e-90
 Identities = 191/452 (42%), Positives = 252/452 (55%), Gaps = 36/452 (7%)

Query: 13  ALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQRQTLTGLRLD--FQSGY 70
           A+A G LAQQ  A GF++DSKA++  R  Y + D R +     +    G   D  F SGY
Sbjct: 9   AVAVGVLAQQAGAAGFIEDSKATLGLRNFYINTDNRDSAATTNKSEEWGQGFDLRFTSGY 68

Query: 71  TEGVVGLGLDLQALAGFTLSGGTSPHNASTVN---TVSPVTTDGSPVDNWSRIGGNARFK 127
           T+G VG G+D   L G  L  G   + AS  +   TV P  ++G  VDN+S +G  A+ K
Sbjct: 69  TQGTVGFGIDAIGLLGIRLDSGGGTNGASNNSYGGTVFPSKSNGEAVDNFSSLGLTAKAK 128

Query: 128 YSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRASS 187
            S+TELK G  L   LPV+++NDGRLLP +FQG  +TSNE ++LTL GG +  A GR SS
Sbjct: 129 ISQTELKLGT-LQPKLPVIVTNDGRLLPQTFQGGQITSNEIKDLTLVGGQIEHAKGRNSS 187

Query: 188 NWAGISGGGAKG-------SDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLGLIHSF 240
           N   +S  GA G       S+ F + GGD+ + K+L  QYYY NLED+Y Q+FLGLIH++
Sbjct: 188 NNEELSIAGANGRTASGRDSNKFIYGGGDYKITKDLTAQYYYGNLEDFYKQHFLGLIHNW 247

Query: 241 DMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYN---ENGKIDNTTWSLAFTYKAGGH 297
            +G G  L +DLRYF S SDG NG DS Y     Y      GK+DN  +S  F Y   GH
Sbjct: 248 AIGPG-VLKSDLRYFNSRSDGANGHDSTYYTTGYYGGSVTKGKVDNNLYSGLFLYTVAGH 306

Query: 298 ALTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFG 357
               G+Q  +  S F  +N           +G+G   S YL TD+ +  F RAGE +  G
Sbjct: 307 TFGGGYQASNGDSDFPWLN-----------QGDG--SSAYLTTDMQIAKFARAGERTWQG 353

Query: 358 LYSYDFAALGVPGLKAGWTYVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFKGLGF 417
            YSYDFA LGVPGL AG  Y+ G +I    +  TG   EWE D  + YV+  G  K +G 
Sbjct: 354 RYSYDFAKLGVPGLTAGVIYLRGDNI----DHATGDKTEWERDITVGYVVPEGALKNVGV 409

Query: 418 TLRKGVFRTGLPDSTLKDQDQVRFFVNYTYAL 449
             +   +R  +P    +DQD+ R  V+Y+  L
Sbjct: 410 MWKNATWRNDIPGQ--RDQDENRLIVSYSIPL 439