Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score = 84.0 bits (206), Expect = 4e-21
 Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 5/231 (2%)

Query: 6   RQIEAFRTVMREGSMVRASAAMAVTQPAISYMISGLEAAVGFPLFNRQGGKLSATPEAIQ 65
           R ++ F  V    S  +A+AA+ V+QPA+S  +  LE ++G  LF+R G     T     
Sbjct: 8   RHVQYFLAVAEHLSFTKAAAALHVSQPALSQQVRQLEESLGAQLFDRSGRTTRLTDAGDV 67

Query: 66  LLAEVDRLYQGLESVEAVAHKIANYGNAELRILITQALSAGRIVNGIGKFAALHPGIKID 125
            L    R YQ L   ++  H +++     LR+ +T   +   +   I  F + +P I ++
Sbjct: 68  YLLYARRAYQQLREAKSAIHDVSDLTRGSLRLAVTPTFTTYLVGPVIKAFHSRYPKITLN 127

Query: 126 LDVEHRELITHRVNSGQADLGIL---SISPGLEDQSSTLFSSPIICVASPDAQISQSAVV 182
           L    +E I   + +G+ D GI      +P ++  +  L +  +  V S   ++++   +
Sbjct: 128 LKEISQERIEELLLAGELDAGIAFDEINTPNID--AIPLLNETLALVVSRQHRLAEERSI 185

Query: 183 TASQLDGVPIVALKASGLIRPMVDKWFHEAGVTPNYTIEVGGAGTAIELVR 233
               L+   ++ L      R  +D++F    + P   +E    G  IE+VR
Sbjct: 186 GLQDLNAESLILLSPEFATREQIDRYFRTHAIHPQVQMEANALGAVIEIVR 236