Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 323 a.a., ndhF3 operon transcriptional regulator from Synechococcus elongatus PCC 7942

 Score = 90.1 bits (222), Expect = 6e-23
 Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 3/260 (1%)

Query: 3   IKLRQIEAFRTVMREGSMVRASAAMAVTQPAISYMISGLEAAVGFPLFNRQGGKLSATPE 62
           + L Q++ F    R  S  RA+  + +TQP +S  +  L  AVG PLF + G +L  T  
Sbjct: 4   LTLHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYLTEA 63

Query: 63  AIQLLAEVDRLYQGLESVEAVAHKIANYGNAELRILITQALSAGRIVNGIGKFAALHPGI 122
             QL     ++++ LE ++     +      +LR+ +    +   I   IG F   +PGI
Sbjct: 64  GRQLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRLAVI-TTAKYFIPRLIGPFCQRYPGI 122

Query: 123 KIDLDVEHRELITHRVNSGQADLGILSISP-GLEDQSSTLFSSPIICVASPDAQISQSAV 181
            + L V + E + +R+N    DL +LS  P G +        +P++ V      ++    
Sbjct: 123 NVSLKVTNHEGLINRINDNLDDLYVLSRPPSGFDITVQPFLDNPLVVVGPASHPLANQRG 182

Query: 182 VTASQLDGVPIVALKASGLIRPMVDKWFHEAGVTPNYTIEVGGAGTAIELVRGGLGVTFV 241
           ++  +L   P +  +     R   ++ F    +  N  +++G      + + GGLG+  +
Sbjct: 183 ISLERLAQEPFILRERGSGTREATEQLFAAHNLNLNVKLDLGSNEAIKQAILGGLGLAVL 242

Query: 242 NSFSLMER-ADSQLQSFGLD 260
           +  +L    A  +L+ F ++
Sbjct: 243 SYHTLTSAGATPELKMFEVE 262