Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 307 a.a., Octopine catabolism/uptake operon regulatory protein OccR from Enterobacter sp. TBS_079

 Score =  105 bits (263), Expect = 1e-27
 Identities = 68/293 (23%), Positives = 133/293 (45%), Gaps = 9/293 (3%)

Query: 3   IKLRQIEAFRTVMREGSMVRASAAMAVTQPAISYMISGLEAAVGFPLFNRQGGKLSATPE 62
           + LR IE F  VM  G++  A+  +  +QP +S  ++  E  +G  LF R  G+L  T +
Sbjct: 4   VNLRHIEIFHAVMTTGNLTEAAQMLHTSQPTVSRELARFEKVLGLKLFERTRGRLHPTVQ 63

Query: 63  AIQLLAEVDRLYQGLESVEAVAHKIANYGNAELRILITQALSAGRIVNGIGKFAALHPGI 122
            ++L  EV R + GL+ + + A  +  +   EL I+     S   +   +  F A +P +
Sbjct: 64  GLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIVCLPVFSQSFLPTLLQPFLARYPEV 123

Query: 123 KIDLDVEHRELITHRVNSGQADLGIL-SISPGLEDQSSTLFSSPIICVASPDAQISQSAV 181
            + +  +   L+   +++ + DLG+  ++S     + + L S   +CV      +++  +
Sbjct: 124 NLTIVPQESPLLEEWLSAQRHDLGLTETLSTPAGTERTELLSLDEVCVLPAGHPLARKQI 183

Query: 182 VTASQLDGVPIVALKASGLIRPMVDKWFHEAGVTPNYTIEVGGAGTAIELVRGGLGVTFV 241
           +T +   G   ++L  +   R ++D  F E  V     +E   A +   +VR G+GV+ V
Sbjct: 184 LTPADFHGENYISLSQTDSYRQLLDSLFAEHQVKRRMVVETHSAASICAMVRAGVGVSVV 243

Query: 242 NSFSLMERADSQLQSFGLDNSLELKIGVINSSSLHPNRAAHALMQYLTQIYTE 294
           N  + ++ A   +       S+   + +I        R  H  +  L + +TE
Sbjct: 244 NPLTALDYAGRDIVIRPFSLSVPFTVSLI--------RPLHRPVSALVEAFTE 288