Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  160 bits (406), Expect = 8e-44
 Identities = 143/512 (27%), Positives = 229/512 (44%), Gaps = 44/512 (8%)

Query: 8   LRSSALAALVTLSGISPLALAQDSARATISVSPGIADITSLDPHRASLVGDKGIVAEMFN 67
           +R+  LA + T + +   ALA D  +          D+++LDP       +  ++  +F+
Sbjct: 1   MRNLLLAGVCTAALMGNPALADDIKQGGEMTVTYKDDVSTLDPAIGYDWQNWSMIKSLFD 60

Query: 68  ALVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYGELKAADVVYSLQR 127
            L+ + PG+++   L  DLAE +E S+D K++TF LRKGV FH G  EL A DV YS++R
Sbjct: 61  GLMDYVPGTTE---LRPDLAESYEISEDGKIFTFKLRKGVKFHNGR-ELTAQDVKYSIER 116

Query: 128 AADPKRSSFSANFTA---------------LEKVEALDDYTVKVTLKYPDTAFLGRVSNY 172
             +P   S  A F A               L  +   D +T++  L  PD  FL  V   
Sbjct: 117 VVNPATQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFL-HVMAL 175

Query: 173 HGGQIVSKAAAEKLGERYGQAPIGTGPFAFSEH-ITQQYVKLVANDQYFRGKPKLGAIVY 231
           +   +V K   EK G  +G+ P+G+G F  +E  + Q+ V     D +  G PKL  I +
Sbjct: 176 NFAHVVPKEEVEKHGADFGKNPVGSGAFKLAEWTLGQRLVFERFTDYWNEGLPKLDRITF 235

Query: 232 RMIPSDSARELAFASDELDLML-GKREQRWVERSRARGVNVDVFEPAEFRTLFLNRNIK- 289
            +        L   + E+D+   G    ++VE +        +    +  T ++  N+K 
Sbjct: 236 EVGQEPVVALLRLQNGEIDVPGDGIPPAKFVEVTNDPNFKDLIIRGGQLHTGYVTMNVKM 295

Query: 290 -PLDDVKVRQAIAASVNINEIIRYA-GKDVADGGCSIIPNGYQGLDCSAGPYAYDPAHAK 347
            P D V+VR+A+  ++N + I+R   G+ VA      +P    G       YAYDP  AK
Sbjct: 296 APFDKVEVRKAVNMAINKDRILRIINGRAVAAN--QPLPPSMPGYAKDYAGYAYDPEGAK 353

Query: 348 ALLASAGYPNGLKLKSVVSNAAPQLPIMEIIQAQLAKAGITLEMEVVDHATYQAKSRQDQ 407
            LL  AG  +G   +  V N  PQ  I + IQ  L   GIT  ++ +  A   A   ++ 
Sbjct: 354 KLLEQAGLGDGFSTELYVMNTDPQPRIAQAIQQDLKAIGITASIKSLAQANVIAAGGEEN 413

Query: 408 SAIVFYGAARYPGADYWLTEFYDSASAIG--------APAAMSNFGHCS-VADDAIRKAR 458
            A + +      G   W+ +F D ++  G         P   +   +C+   D    +A 
Sbjct: 414 QAPMIWS-----GGMAWIADFPDPSNFYGPILGCGGAVPGGWNWSWYCNEELDKKAAEAD 468

Query: 459 VEADPQTQLD---LWKKAQVQIHDDVCAIPLF 487
             ADP    +   LW+   ++I +D    P+F
Sbjct: 469 AIADPAKAAEREALWRDIYLKIMEDAPWAPIF 500