Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  169 bits (427), Expect = 3e-46
 Identities = 155/508 (30%), Positives = 227/508 (44%), Gaps = 35/508 (6%)

Query: 12  ALAALVTLSGISPLALAQDSARATISVSPGIADITSLDPHRASLVGDKGIVAEMFNALVR 71
           ALAAL      +  A AQ      + V   IA+  SLDPH  +   D  I+  +++ LVR
Sbjct: 10  ALAALAFAGAAAAPAAAQTPP--DVLVVGQIAEPQSLDPHTVTATNDFRILVNVYDGLVR 67

Query: 72  FPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYGELKAADVVYSLQRAA-- 129
           F  G+ +   +E  LAE W+ SDD K +TF LR+GV FH G     A  V ++  R    
Sbjct: 68  FKDGTLE---VEPALAESWKISDDGKTYTFTLRQGVKFHDG-SNFDAEAVKFNFDRMLKK 123

Query: 130 -----DPKRSSFSANFTALEKVEALDDYTVKVTLKYPDTAFLGRVSNYHGGQIVSKAAAE 184
                D      S NF +++ V  LD++TV+  L      FL  ++ Y  G IVS  A E
Sbjct: 124 DHPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLA-YPTGLIVSPVAVE 182

Query: 185 KLGERYGQAPIGTGPFAFSEHITQQYVKLVANDQYFRGKPKLGAIVYRMIPSDSARELAF 244
           K G+ YG++P GTGPF F E ++ Q V +  N  Y+    KL A+V+R I   + R    
Sbjct: 183 KHGKEYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAKLQAVVFRPITDANTRVAEM 242

Query: 245 ASDELDLMLGKREQRWVERSRARGVNVDVFEPAEFRTLF--LNRNIKPLDDVKVRQAIAA 302
            +  +D+M+          +  +  N  V E A     F  LN    P  D +VRQA   
Sbjct: 243 MAGGIDVMVEVPPDNLA--TFEQDANFAVAEQAGPHVWFTILNTKQGPFADKRVRQAANY 300

Query: 303 SVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSAGPYAYDPAHAKALLASAGYPNGLKLK 362
           +VN   ++    +  A      IP  +  ++ S  PYA+DP  AKALLA AG  N     
Sbjct: 301 AVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYAHDPEKAKALLAEAGVENPQVTF 360

Query: 363 SVVSNAAPQL-PIM--EIIQAQLAKAGITLEMEVVDHATYQAK------SRQDQSAIVFY 413
            V    +  L PI     IQA L   G  +++E  +  T+  +       + D + + + 
Sbjct: 361 YVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPGLEGKADMAEMAW- 419

Query: 414 GAARYPGADYWLTEFYDSASAIGAPAAMSNFGHCS--VADDAIRKARVEADPQTQLDLWK 471
                P    +LT   D+    G      N G+ S    D+ + KAR   D   +  L+ 
Sbjct: 420 -MTNDPDTVPYLTLRTDAMPDKGG----FNSGYYSNPQLDELLEKARRSTDQAERGKLYG 474

Query: 472 KAQVQIHDDVCAIPLFGLKQVWAKAASV 499
           + Q  +HDD   + +   KQ     A+V
Sbjct: 475 EVQSIVHDDAPWLFVANWKQNAVTTAAV 502