Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 546 a.a., putative periplasmic dipeptide transport protein DppA from Phaeobacter inhibens DSM 17395

 Score =  134 bits (336), Expect = 1e-35
 Identities = 129/519 (24%), Positives = 222/519 (42%), Gaps = 27/519 (5%)

Query: 6   LTLRSSALAALVTLSGISPLALAQDSARATISVSPGIADITSLDPHRASLVGDKGIVAEM 65
           + L  SAL A V    ++  A+A   A A I V+  I DI ++DP +A       +V  +
Sbjct: 19  MNLVKSALLASVMALPLASGAVADTPANALI-VAQNIDDIVAIDPAQAYEFTSGELVTNL 77

Query: 66  FNALVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYGELKAADVVYSL 125
           ++ LV++   + DP AL A LA  WE   + K   F LR   +FH G   ++  DVV+SL
Sbjct: 78  YDRLVQYD--AEDPTALAAGLASDWEVDAETKTIRFTLRDDAVFHSG-NPVRGEDVVFSL 134

Query: 126 QRAAD----PKRSSFSANFTALEKVEALDDYTVKVTLKYP---DTAFLGRVSNYHGGQIV 178
            R       P        +TA    + +      +T+KY      AF+  V       +V
Sbjct: 135 ARVIKLNLTPAFILAQLGWTAENVDQMVTADGNSITIKYEGDFSPAFVMNVLAARPASVV 194

Query: 179 SK------AAAEKLGERY-GQAPIGTGPFAFSEHITQQYVKLVANDQYFRGKPKLGAIVY 231
            K      A    +G  +  +   G+GPF    +   Q V+L AN  YF+G PK+ +++ 
Sbjct: 195 DKEVVMANAVDGDMGNGWLNENAAGSGPFKLQGYRPAQMVRLAANADYFKGAPKMESVII 254

Query: 232 RMIPSDSARELAFASDELDLMLGKREQRWVERSRARGVNVDVFEPAEFRTLFLNRNIKPL 291
           R +   + +EL   S ++D+       + +    +  + V+ +  A    L  N+    L
Sbjct: 255 RHVAEAATQELLLESGDIDMARNLTPDQ-IRGFDSDAIKVETYPQAAVHFLSFNQKTDSL 313

Query: 292 DDVKVRQAIAASVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSAGPYAYDPAHAKALLA 351
            D  V +A    VN   +         +   +  P G+ G      P+ YDP  AK++L+
Sbjct: 314 TDPAVWEAARYLVNYKGMTDTIINGQMEVHQAFWPKGFPG-SYDETPFGYDPERAKSILS 372

Query: 352 SAGYPNGLKLKSVVSNAAPQLPIMEIIQAQLAKAGITLEM--EVVDHATYQAKSRQDQSA 409
            AG    + +   V NAAP   + + +QA  A AGI  E+          + + R  ++ 
Sbjct: 373 DAGIETPITVSLDVINAAPFTDMAQSLQASFADAGINFEILPGTGSQVITKYRERSHEAM 432

Query: 410 IVFYGAARYPGADYWLTEFYDSASAIGAPAAMSNFGHCSVADDAI----RKARVEADPQT 465
           ++++G              Y+S ++    AA + + +     + +    + A  EADP+ 
Sbjct: 433 LLYWGPDFMDPHSNAKAFAYNSDNSDDNYAATTTWRNAWAVPEEMNAKTKAALTEADPEK 492

Query: 466 QLDLWKKAQVQIHDDVCAIPLFGLKQVWAKAASVDYGYV 504
           +L+++++ Q  +      + +F      A  A V  GYV
Sbjct: 493 RLEMYRELQADVQQSSPIVIMFQAAYQVAMDADVS-GYV 530