Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 530 a.a., peptide ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  147 bits (370), Expect = 1e-39
 Identities = 140/509 (27%), Positives = 229/509 (44%), Gaps = 49/509 (9%)

Query: 7   TLRSSALAALVTLSGISPLALAQDSARATISVSPGI-ADITSLDPHRASLVGDKGIVAEM 65
           T  + ALAAL   S IS   L   S  +  + +P +    TS+D   AS V        +
Sbjct: 6   TTLALALAALTASSAISAKTLVYCSEGSPENFNPQLYTSGTSVD---ASAV-------PV 55

Query: 66  FNALVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGY-----GELKAAD 120
           +N LV F  G+++   L   LAE WE S+D KV+ F LRKGV F          +  A D
Sbjct: 56  YNRLVDFKAGTTE---LVPSLAESWEVSEDGKVYIFHLRKGVKFQSNKYFKPSRDFNADD 112

Query: 121 VVYSLQRAADPKR------SSFSANFTALE------KVEALDDYTVKVTLKYPDTAFLGR 168
           V++S  R  DP+       S   +NF +LE       ++  D+YTV+ TL + +  F+  
Sbjct: 113 VIFSFMRQKDPQHPYHNISSGNYSNFESLEFGQLITAIDKPDEYTVRFTLAHAEAPFVAD 172

Query: 169 VSNYHGGQIVSKAAAEKLG----ERYGQAPIGTGPFAFSEHITQQYVKLVANDQYFRGKP 224
           ++ Y    + ++ A   L     ER    PIGTGPF  +++     +   A  +Y++GK 
Sbjct: 173 LAWYFASILSAEYADAMLKAGTPERVDMDPIGTGPFKLAQYQKDSRILFTAFPEYWQGKA 232

Query: 225 KLGAIVYRMIPSDSARELAFASDELDLMLGKREQRWVERSRARGVNVDVFEPAEFRTLFL 284
            +  +++ + P  S R      +E  +M              + +N+     A   T FL
Sbjct: 233 HIDRLIFSITPDASVRYAKLEKNECQVMPFPNPADLPRMKENKAINL--MSKAGLNTGFL 290

Query: 285 NRNIK--PLDDVKVRQAIAASVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSAGPYAYD 342
             N +  PLD+VKVRQA+A ++N   II            +++P G    +     Y YD
Sbjct: 291 AFNTQKAPLDNVKVRQALAMAINKPAIIEAVFHGTGTAAKNLLPPGVWSANSQLKDYEYD 350

Query: 343 PAHAKALLASAGYPNGLKLKS-VVSNAAPQLP----IMEIIQAQLAKAGITLEMEVVDHA 397
           P  AKALLA +G    + +    +    P  P    + E+IQA  AK G+  ++   +  
Sbjct: 351 PQKAKALLAESGVAGPISIDLWAMPVQRPYNPNAKRMAEMIQADWAKIGVQTKITTYEWG 410

Query: 398 TY--QAKSRQDQSAIVFYGAARYPGADYWLTEFYDSASAIGAPAAMSNFGHCSVADDAIR 455
            Y  + K  + Q+A++ +  A     +++   F   ++  G+ +A   +      D  I 
Sbjct: 411 EYLKRVKDGEHQAALMGWTTATGDPDNFFGPLFTCQSANGGSNSAKWCY---QPFDKIIA 467

Query: 456 KARVEADPQTQLDLWKKAQVQIHDDVCAI 484
           +A+   D Q +  L+ +AQ  +HD + A+
Sbjct: 468 EAKSITDRQKREALYLQAQQMMHDQMPAV 496