Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 528 a.a., dipeptide transport system substrate-binding protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  132 bits (332), Expect = 3e-35
 Identities = 143/513 (27%), Positives = 222/513 (43%), Gaps = 51/513 (9%)

Query: 8   LRSSALAALVTLSGISPLALAQDSARATISVSPGIADITSLDPHRASLVGDKGIVAEMFN 67
           +R   LAA V ++  + L LA+     T S SP   D+   +    SLV        +FN
Sbjct: 1   MRFKLLAAAVLVTAPA-LVLAKPLTVCTES-SPDGFDVVQFN----SLVTTNASADVIFN 54

Query: 68  ALVRFPPGSSDPAALEA--DLAERWESSDDKKVWTFFLRKGVMFHGG-----YGELKAAD 120
           +L  +     D AA +    LA++W+ S D   +TF LR  V F           L A D
Sbjct: 55  SLASY-----DEAAKKVVPSLADKWDVSADGLTYTFHLRPNVQFQTTDYFKPSRPLNADD 109

Query: 121 VVYSLQRAADPKR--------SSFS-ANFTALEK----VEALDDYTVKVTLKYPDTAFLG 167
           VV++  R  +           S F  A    L K    +  +DD TVK  L  PD  F+ 
Sbjct: 110 VVFTFDRMLNDSNPWHKVAGASGFPHAQSMGLPKLIKSISKVDDNTVKFELNAPDATFVS 169

Query: 168 RVSNYHGGQIVSKAAAEKLGERYGQA-----PIGTGPFAFSEHITQQYVKLVANDQYFRG 222
            +       I S   A++L +   Q      PIGTGPF    +     ++   N  Y+  
Sbjct: 170 -ILTMGFASIYSAEYADQLLKAGKQVDLNSKPIGTGPFELKSYTKDAVIRYDVNPSYWGT 228

Query: 223 KPKLGAIVYRMIPSDSARELAFASDELDLMLGKREQRWVERSRARGVNVDVFEPAEFRTL 282
           KPK+  ++Y + P  + R     + E  + L  + Q   +    + + + V  PA F T 
Sbjct: 229 KPKIDRLIYAITPDATVRAQKVKAGECQIALSPKPQDLADAKGDKSLAI-VQTPA-FMTA 286

Query: 283 F--LNRNIKPLDDVKVRQAIAASVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSAGPYA 340
           F  LN   KPLD+ KVR A+  + +    ++    + A    +  P      D +  P+ 
Sbjct: 287 FVALNTQKKPLDNQKVRAALNMAFDRTTYLKTVFDNTATPAVNPYPPNTWSYDKAVKPWP 346

Query: 341 YDPAHAKALLASAGYPNG------LKLKSVVSNAAPQLPIMEIIQAQLAKAGITLEMEVV 394
           YDPA AK LLA AGYPNG      ++    V N  P+    E++QA  AK G+  +++V+
Sbjct: 347 YDPAKAKKLLADAGYPNGFETTIWVRPNGSVLNPNPKAG-AELLQADFAKIGVKADVKVI 405

Query: 395 DHATYQAKSRQDQSAIVFYGAARYPG-ADYWLTEFYDSASAIGAPAAMSNFGHCSVADDA 453
           +      +++Q Q   +F G A   G  D +L+  + S +A+ +    + F +  + D  
Sbjct: 406 EWGELIKQAKQGQHDSLFMGWAGDNGDPDNYLSPLF-SCNAVKSGINFARFCNEDL-DKL 463

Query: 454 IRKARVEADPQTQLDLWKKAQVQIHDDVCAIPL 486
           I   +   D   +   ++ AQ  IHD    IPL
Sbjct: 464 IADGKSTPDQAKRAKAYQAAQQIIHDQALWIPL 496