Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 283 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  228 bits (580), Expect = 2e-64
 Identities = 117/275 (42%), Positives = 171/275 (62%), Gaps = 1/275 (0%)

Query: 4   LTAPLVSKPTTLWQALFQNRLSW-IGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPP 62
           ++A  VS     W+ LF  RL+  IG G+L+  +L+A+ AP++APYDP+ QN A RL+PP
Sbjct: 1   MSAGTVSSSPAGWRLLFGRRLALVIGAGILLFFLLLAIGAPVVAPYDPILQNGAARLQPP 60

Query: 63  SAEFWLGTDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLIT 122
           S     GTD +GRD+LSR+I+GTR+ L +  + V    V+G+ +G IAG+ GGI D L  
Sbjct: 61  SLLHPFGTDNFGRDLLSRVIWGTRIDLQIALIGVAFPFVIGTIVGTIAGFFGGIVDALFM 120

Query: 123 GFVDVLLSFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEA 182
             VD++L+FP L+L L + A+LG  L +  IA+A+     + R+ RA  + LK  D+  A
Sbjct: 121 RLVDIILAFPFLVLMLSIIAILGPGLGSFYIAMALVGWVSYARLIRAQILVLKNSDYAVA 180

Query: 183 GRSLGYGPGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMI 242
             SLG+G  R+M  H+LPN I+  +V         + + A++S++GLGV PP   WG M+
Sbjct: 181 AVSLGFGRFRIMFRHLLPNAIAGSIVFAMSDAVLVLLSGAAVSYLGLGVQPPVAEWGVMV 240

Query: 243 REGFENILDAWWLTVFPSLAILLTVLALSLLGDAL 277
            EG   I  AWW+T+FP L+I+      S+LGDAL
Sbjct: 241 AEGQSFITTAWWITLFPGLSIVSLAFGFSMLGDAL 275