Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 302 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  238 bits (608), Expect = 9e-68
 Identities = 132/296 (44%), Positives = 183/296 (61%), Gaps = 12/296 (4%)

Query: 3   TLTAPLVSKPTT------LWQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIA 56
           T T  + + PT        W    +NR + IG+   + +VL+A+FAPL+AP++P  Q   
Sbjct: 5   TATTAISTDPTRRARLAEFWYYFSENRGAVIGLFFFLFLVLLAIFAPLVAPHNPTIQFRE 64

Query: 57  YRLEPP------SAEFWLGTDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIA 110
             L PP       A F LGTD  GRD+LSRLIYGTR SL VG +  ++++  G  +GVIA
Sbjct: 65  AVLLPPVWQEGGRATFLLGTDAVGRDMLSRLIYGTRFSLFVGVIVTVLSLTGGILVGVIA 124

Query: 111 GYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAP 170
           GY  G  D +I   +D++L+FP+LLL L++ A+LG  L N +IAIA+     FVR+ RA 
Sbjct: 125 GYFRGWIDTVIMRVMDIILAFPSLLLALVLVAVLGPGLTNAMIAIALVFQPHFVRLTRAA 184

Query: 171 TIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLG 230
            +  K RD+V A +  G G  RLM   ILPN ++ ++V   L  ++AI   A+L F+G+G
Sbjct: 185 VMTEKTRDYVVAAKVAGAGHARLMFKTILPNCMAPLIVQATLSFSSAILDAAALGFLGMG 244

Query: 231 VPPPAPTWGSMIREGFENILDAWWLTVFPSLAILLTVLALSLLGDALRDANDPKTR 286
             PP P WG+M+ E  E IL AWW+   P LAIL+TVLA++L+GD LRDA DPK +
Sbjct: 245 AQPPTPEWGTMLAEAREFILRAWWVVTLPGLAILVTVLAINLMGDGLRDALDPKLK 300