Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  228 bits (580), Expect = 2e-64
 Identities = 114/277 (41%), Positives = 177/277 (63%), Gaps = 6/277 (2%)

Query: 19  LFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPP------SAEFWLGTDT 72
           L+ ++ + IG+ L+++IV +ALFAPLIAPYDP  Q+I  RL+PP      + E  LGTD 
Sbjct: 25  LWHDKTAAIGLALILLIVFLALFAPLIAPYDPAAQSIMARLKPPVWMERGTWEHLLGTDN 84

Query: 73  YGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFP 132
            GRDVLSR+I+G R +L +G V  ++A  +G+ +G+ AG++GG TD ++   VD+ +SFP
Sbjct: 85  LGRDVLSRIIWGARATLTIGAVTCLLAATLGTVIGLWAGFMGGRTDSILMRLVDIQVSFP 144

Query: 133 TLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGR 192
            +LL L+V A+LG  +  L+  +++T    + R+ R    + +Q  +VEA   +G  P R
Sbjct: 145 GILLILLVVAVLGPGVWTLVAVLSVTNWMVYARLVRGIVSSTRQTPYVEAAEVIGCRPAR 204

Query: 193 LMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDA 252
           ++  HILPN++S ++ L  L     +  EA++SF+G GV PPA +WG  +  G + +  A
Sbjct: 205 VIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFLGFGVQPPATSWGLDVASGRDYLFIA 264

Query: 253 WWLTVFPSLAILLTVLALSLLGDALRDANDPKTRSER 289
           WWL  FP LAI+ TVL+++L  + LR   DP+ R +R
Sbjct: 265 WWLVTFPGLAIVATVLSINLFANWLRVTTDPEEREKR 301