Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 310 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  246 bits (627), Expect = 6e-70
 Identities = 122/269 (45%), Positives = 171/269 (63%)

Query: 16  WQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGR 75
           W    +N L+ IG+ + + +V++A FAP IAP+DPL   ++ RL PPSA  WLGTD  GR
Sbjct: 40  WLVFIRNPLAVIGLAIFLCLVILATFAPWIAPHDPLFGTLSERLLPPSAGHWLGTDQQGR 99

Query: 76  DVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLL 135
           D+ SR+++G+R +L++ F+  + A  VG  +G  AG+VGGI +  +    D  L+FP L+
Sbjct: 100 DIWSRIVFGSRTTLMIIFLVAITAAPVGLLIGTTAGFVGGIVEAALMRLTDAFLAFPKLI 159

Query: 136 LGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMT 195
           L L  AA LGA LEN ++AIA+T   P+ RIARA T+A+++ DFV A R  G  P R++ 
Sbjct: 160 LALAFAAALGAGLENAVLAIALTAWPPYARIARAETLAVRRTDFVAAARMCGSSPLRILI 219

Query: 196 VHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWL 255
             I+P  I  ++V  +L MA  I   A L F+GLGV PP P WG+M+ EG   IL  WW+
Sbjct: 220 GQIMPMCIPSLVVRVSLDMAGVILIAAGLGFLGLGVAPPQPEWGAMVSEGRSQILAQWWV 279

Query: 256 TVFPSLAILLTVLALSLLGDALRDANDPK 284
             +P +AI +  L  +LLGD LRD  DPK
Sbjct: 280 CTYPGIAICIVSLGFNLLGDGLRDVLDPK 308