Pairwise Alignments

Query, 373 a.a., putative Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 453 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

 Score =  140 bits (353), Expect = 7e-38
 Identities = 84/220 (38%), Positives = 129/220 (58%), Gaps = 12/220 (5%)

Query: 3   YRATPSRRVYIPKADGRQRPLGIASLEDKIVQQAVVTVLNAIYEEDFLGFSYGFRPGRSQ 62
           YR  P RRV IPK DG +R LGI ++ D+++QQA++ VL  + +  F   S+GFRPGRS 
Sbjct: 99  YRPMPVRRVTIPKPDGGERELGIPTVTDRLIQQALLQVLQPLLDPAFSEHSHGFRPGRSA 158

Query: 63  HDA-LDALTVALKGQKVNWILDADITSFFDEIDHEWMLMFLGHRIADRRLLGLICKWLQA 121
           HDA L+A +    G+++  ++D D+  FFD ++H+ ++  L  RI+DRR++ LI  +L +
Sbjct: 159 HDAVLEAQSYVQSGRRI--VVDVDLEKFFDRVNHDILIDRLSKRISDRRVIRLIRAYLNS 216

Query: 122 GVMEDGRRVVATKGTPQGAVISPLLANIYLHYVLDLWARQWRQRHARGDVIIVRYADDSV 181
           G+M+ G       GTPQG  +SPLLAN+ L  V        ++   RG    VRYADD  
Sbjct: 217 GIMDHGVVQERVMGTPQGGPLSPLLANVLLDEV-------DKELERRGH-CFVRYADDCN 268

Query: 182 VGFRTKVQAQQFLVQLQERLARFGLSLNASKTRLIE-FGR 220
           V   ++   ++ +  L+    R  L++N  K+ +   FGR
Sbjct: 269 VYVGSRKAGERVMALLRRLYGRLHLTINEGKSAVTSVFGR 308