Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 522 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N2E2

 Score =  763 bits (1969), Expect = 0.0
 Identities = 380/519 (73%), Positives = 419/519 (80%), Gaps = 11/519 (2%)

Query: 1   MTFSPNLDQMTPEQLRALAAQALQ-----------LQSQVEAMSRKIQNDEILIEQFKFE 49
           MT  PNLD +TPEQLRALAAQ +Q           L   VE M +KI  D+ +IE+   E
Sbjct: 1   MTSLPNLDHLTPEQLRALAAQLIQRVETLDHQVDTLGKTVETMGKKINRDQTVIEKLTHE 60

Query: 50  IALLKRHKFAKRSEQISPAQGSLLDDLLDTDLEAIEAELKQLLPASSQAEPRQSPKRAPL 109
           IA LKR KFAKRSEQ++P Q  LLDDL+DTD+ AIEAEL+ L    +  E +Q PKR  L
Sbjct: 61  IAQLKRLKFAKRSEQMNPEQAGLLDDLVDTDIAAIEAELQALQTVLAPTEKKQKPKRTAL 120

Query: 110 PPQFPRAVIRHEPENTQCACGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETL 169
             +FPR +I HEP+NT C C C L+RIGEDVSEKLDYTPGVFTVE+H+RGKW C  CETL
Sbjct: 121 SAEFPRTLIHHEPDNTHCPCACALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETL 180

Query: 170 IQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQT 229
           IQAPVPAQVIDKGIPTAGLLAHVM+AKFADHLPLYRQE I GRAGLAI RSTLAQWVG T
Sbjct: 181 IQAPVPAQVIDKGIPTAGLLAHVMIAKFADHLPLYRQESIFGRAGLAIPRSTLAQWVGVT 240

Query: 230 GVRLQPLVDALREAVLKQGVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALNAVVYD 289
           GV+LQPLVDALR+ VL Q VIHADETPVQML PG KKT R+YVWAY+T+ FS L AVVYD
Sbjct: 241 GVQLQPLVDALRDVVLGQQVIHADETPVQMLVPGSKKTQRSYVWAYTTSQFSNLAAVVYD 300

Query: 290 FSPSRAGEHARNFLGDWSGKLVCDDFAGYKAGFEQGITEIGCMAHARRKFFDLHVANKSQ 349
           FSPSRAGEHARNFL DW  KLVCDDF GYKA FE G+TEIGCMAHARRKFF+LH  NKS 
Sbjct: 301 FSPSRAGEHARNFLQDWKCKLVCDDFGGYKASFELGVTEIGCMAHARRKFFELHATNKST 360

Query: 350 LAEQALHSISGLYEVERQAREMSDEDRWRIRQELAVPISKTLHEWMLAQRDLVPNGSATA 409
           LAEQAL  I  LYE+E + R++  + R RIRQE AVP+   LH WM+AQRDLVP GSA +
Sbjct: 361 LAEQALRYIQLLYEIESEVRDLEPDLRRRIRQERAVPVMDMLHAWMIAQRDLVPEGSAIS 420

Query: 410 KALDYSLKRWVALTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMS 469
           +ALDYSLKRW AL+RYLDDG VPIDNN  ENQIRPWALGR NWLFAGSLRSGKRAAAIMS
Sbjct: 421 RALDYSLKRWAALSRYLDDGDVPIDNNWCENQIRPWALGRKNWLFAGSLRSGKRAAAIMS 480

Query: 470 LIQSARMNGHDPYAYLKDVLTRLPTQRASEIGQLLPHQW 508
           LIQSAR+NGHDPYAYLKDVLTRLPTQ AS+I QLLPHQW
Sbjct: 481 LIQSARLNGHDPYAYLKDVLTRLPTQHASDIDQLLPHQW 519