Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 545 a.a., Transposase from Sinorhizobium meliloti 1021

 Score =  290 bits (742), Expect = 9e-83
 Identities = 184/527 (34%), Positives = 265/527 (50%), Gaps = 24/527 (4%)

Query: 6   NLDQMTPEQLRALAAQALQLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQI 65
           N  Q  P+    L A    LQ++   MS  +Q  + LI + +  IA LK+  F K SE+I
Sbjct: 8   NASQNLPDDPAFLKAMIAALQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSEKI 67

Query: 66  SPAQGSLLDDLLDTDLEAIEAELKQL------LPASSQAE-PRQSPKRAPLPPQFPRAVI 118
                 L   L D  + A E   K L      +PA+  A  P ++ +R P   +      
Sbjct: 68  EREIQQLELALEDLLIAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRPRVSEKAARER 127

Query: 119 RHEPENTQCA-CGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETLIQAPVPAQ 177
           +     T C  CG +L+ +GED SE LD       V +  R K +CR CE ++Q P P++
Sbjct: 128 KELDPGTCCPDCGGELRLVGEDASEILDMIAAQMKVIEVARLKKSCRCCEKMVQLPAPSR 187

Query: 178 VIDKGIPTAGLLAHVMVAKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPLV 237
            I   +  AGLLA+++V+KF DHLPLYR  +I  R G  I  STL  W G+    LQPL+
Sbjct: 188 PIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLI 247

Query: 238 DALREAVLKQGVIHADETPVQMLAPG------EKKTHRAYVWAY--STTPFS--ALNAVV 287
           + +   V+   ++HAD+TP+++L          K   +  +W Y     P++  A    V
Sbjct: 248 ERIEAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAV 307

Query: 288 YDFSPSRAGEHARNFLGDWSGKLVCDDFAGYKAGFEQGITEIG------CMAHARRKFFD 341
           Y F+P    EH  + L   SG L  D + GY   +E G   IG      C AH RR F D
Sbjct: 308 YYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKLYEPGADGIGRFREAACWAHWRRDFHD 367

Query: 342 LHVANKSQLAEQALHSISGLYEVERQAREMSDEDRWRIRQELAVPISKTLHEWMLAQRDL 401
           +  +NKS++A +AL  I  LY++ER       + R   RQ+ +    + L  W  AQ   
Sbjct: 368 IWTSNKSEIAREALDRIGALYDIERDIAGQPADIRLAARQKHSTAKVEALRVWAEAQLTR 427

Query: 402 VPNGSATAKALDYSLKRWVALTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSG 461
           +P     A A  Y L RW +   +L+DG V +DNN  E  +RP  +GR NWLFAG+    
Sbjct: 428 IPGKGDLASAFRYGLSRWHSFCLFLEDGRVAMDNNAAERALRPIGIGRKNWLFAGADTGA 487

Query: 462 KRAAAIMSLIQSARMNGHDPYAYLKDVLTRLPTQRASEIGQLLPHQW 508
           +  A  M++I++A+MNG DP AYL DVL R+   + + + +LLP  W
Sbjct: 488 ETLARAMTIIETAKMNGIDPQAYLADVLDRIHDHKINRLDELLPWNW 534