Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 550 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  280 bits (717), Expect = 7e-80
 Identities = 186/540 (34%), Positives = 282/540 (52%), Gaps = 42/540 (7%)

Query: 1   MTFSPNLDQMTPEQLRALAAQALQLQSQVEAMSRKIQNDEI------------LIEQFKF 48
           ++  PNL    PE ++A AA  +Q +  VE  +R+ +   +            L+E+ + 
Sbjct: 7   LSLFPNLP---PEVVKAFAA--MQFELSVERAARQHEQAVVAEKDAFIAELKELVEKLEG 61

Query: 49  EIALLKRHKFAKRSEQISPAQGSLLDDLLDTDLEAIEAEL----KQLLPASSQAE---PR 101
           ++   +R KF  +SE++ PAQ  L  + L+T +   +A +    K++  ++S  E   PR
Sbjct: 62  QVHDYRRTKFGPKSEKLDPAQMELALEDLETAIAETQARIAAVEKKIEASASDPEKVAPR 121

Query: 102 QSPKRAPLPPQFPRAVIRHEPENTQCACGC-QLQRIGEDVSEKLDYTPGVFTVEQHVRGK 160
           +  K   LP   PR     EPE+  C CGC  + RIGED +E+LD  P  + V   +R K
Sbjct: 122 KERKARALPEHLPRVERVIEPESIVCPCGCGNMVRIGEDRTERLDRVPARYEVIVTIRPK 181

Query: 161 WACRQCET-LIQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKILGRAGLAIAR 219
           +AC +  T ++QA  PA +++   PT  LLA + V+K ++H+PL RQ +++ R G+ I R
Sbjct: 182 YACPKGRTGVVQARAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGVPIDR 241

Query: 220 STLAQWVGQTGVRLQPLVDALREAVLKQGV-IHADETPVQMLAPGEKKTHRAYVWAYSTT 278
           + LA W+G+TG  + P+VD + + +L +   ++ DET   +L PG  KT   Y+WA    
Sbjct: 242 TVLADWMGRTGAAIAPVVDHMAKRLLWESTRLYVDETTAPVLDPGRGKTKTGYLWAVLRD 301

Query: 279 PF----SALNAVVYDFSPSRAGEHARNFLGDWSGKLVCDDFAGYKAGFEQGITEIG---- 330
                 SA   VV+ + P R GE+A   L  ++G +  D + GY       +  +G    
Sbjct: 302 DRGWNGSAPPGVVFHYRPGRKGEYAAEILDGFNGTIQVDAYGGYS--HLATLDRVGGDPL 359

Query: 331 ----CMAHARRKFFDLHVANKSQLAEQALHSISGLYEVERQAREMSDEDRWRIRQELAVP 386
               C AH RRK       + S + ++AL  I+ LY++E   R    E R  +RQ+L++P
Sbjct: 360 KLAFCWAHGRRKLIKATPKSGSPIVDEALVRIAALYKIEDSIRGSDPEHRRAVRQDLSLP 419

Query: 387 ISKTLHEWMLAQRDLVPNGSATAKALDYSLKRWVALTRYLDDGSVPIDNNQVENQIRPWA 446
           +      W+ AQ   V   S   KAL Y L R      +LDDG V ID+N VEN IR  A
Sbjct: 420 LVGAFFAWLAAQAKRVSRKSDLGKALAYMLTRQDGFRLFLDDGHVDIDSNLVENAIRRPA 479

Query: 447 LGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPYAYLKDVLTRLPT-QRASEIGQLLP 505
           + R N LFAG    G+  A   SLI + +MNG +PYAYL D+ TRL     A +I  L+P
Sbjct: 480 MNRRNALFAGHDEGGRNWARFASLIGTCKMNGVEPYAYLCDLFTRLANGHLAKDIDALMP 539